Gene YPK_0226 details

Gene Information

• Locus tag: YPK_0226
• Symbol: aroB
• ID: 6091228
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: +
• Start bp: 264031
• End bp: 265119
• Gene Length: 1089 bp
• Protein Length: 362 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 641595286
• Product: 3-dehydroquinate synthase
• Protein accession: YP_001718992
• Protein GI: 170022487
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0337] 3-dehydroquinate synthetase
• TIGRFAM ID: [TIGR01357] 3-dehydroquinate synthase

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.00000635548
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGAAGA TTACTGTCAC GTTAGGGGAA CGTAGCTACC CCATTACGAT TGCCGCCGGG 
TTGTTTAATG ATCCGGCCTC TTTTAAGCCG CTAAAGGCGG GTGACCAGGT TATGCTGGTC 
ACTAACCAAA CGTTGGCTCC GCTCTATCTG GATTCTCTCC GGGCAGTGTT GGAACACGGT 
GGCATTAAAG TTGATCAGGT GATTTTACCT GATGGTGAGC AGTATAAATC TCTGAGCGTT 
ATGGAGCAGG TTTTTTCTGC CCTTCTGGAA AAACCGCACG GTCGTGATAC TACGTTGGTT 
GCCTTAGGTG GCGGCGTAGT GGGCGACCTG ACCGGTTTTG CCGCAGCTTG CTATCAACGC 
GGTGTGCGCT TTATTCAAGT TCCTACTACT TTACTTTCTC AAGTGGATTC TTCTGTTGGT 
GGTAAAACCG CCGTTAACCA TCCCTTGGGT AAAAATATGA TTGGTGCCTT CTACCAGCCT 
GCATCGGTGG TGGTTGATCT TAATTGTCTT AAAACTCTCC CCCCGCGTGA ACTCGCTTCT 
GGCTTGGCTG AAGTGATCAA ATACGGCATC ATCCTTGATG CAGCTTTCTT CGATTGGTTA 
GAAAACAACA TTGACGCTTT ATTAGCGCTG GATATGTCAG CATTAGCTTA CTGTATTCGC 
CGCTGTTGCG AATTAAAGGC CGATGTCGTT GCTGCTGATG AACGCGAAGA GAGCGGTGCG 
CGCGCTTTAC TCAATTTGGG TCACACCTAT GGTCATGCTA TCGAAGCTGA AATGGGCTAC 
GGAGTGTGGT TACACGGTGA AGCGGTTGCT GCTGGGATGG TGATGGCCGC ACAGACATCC 
CGTCGTCTGG GGCAACTCTC TGTCAGTGAT GTTGAGCGTA TCAAGAAACT CCTATTACGT 
GCTGGTCTAC CCGTTTGTGG GCCTAAAGAA ATGGCACCAG AATCTTATCT GCCACACATG 
ATGCGGGATA AAAAAGTATT GGCGGGTGAA CTTCGTCTGG TACTGCCAAC GGCCATCGGT 
AAATCAGAAA TCCGGGGCGG TGTTGCGCAT GATATGGTGT TGGCATCGAT AGCGGATTGT 
CGGCCATAG 

 

Protein sequence

MEKITVTLGE RSYPITIAAG LFNDPASFKP LKAGDQVMLV TNQTLAPLYL DSLRAVLEHG 
GIKVDQVILP DGEQYKSLSV MEQVFSALLE KPHGRDTTLV ALGGGVVGDL TGFAAACYQR 
GVRFIQVPTT LLSQVDSSVG GKTAVNHPLG KNMIGAFYQP ASVVVDLNCL KTLPPRELAS 
GLAEVIKYGI ILDAAFFDWL ENNIDALLAL DMSALAYCIR RCCELKADVV AADEREESGA 
RALLNLGHTY GHAIEAEMGY GVWLHGEAVA AGMVMAAQTS RRLGQLSVSD VERIKKLLLR 
AGLPVCGPKE MAPESYLPHM MRDKKVLAGE LRLVLPTAIG KSEIRGGVAH DMVLASIADC 
RP