Gene YPK_0199 details

Gene Information

• Locus tag: YPK_0199
• ID: 6089703
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: -
• Start bp: 245621
• End bp: 246259
• Gene Length: 639 bp
• Protein Length: 212 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 641595259
• Product: putative endolysin
• Protein accession: YP_001718965
• Protein GI: 170022460
• COG category: [R] General function prediction only
• COG ID: [COG3179] Predicted chitinase

Plasmid Coverage information

• Num covering plasmid clones: 33
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAATCT CCCTATCACA GTTTCAACTC GCCGCCTCTT TATCTCCCGC GCTCGCATCG 
CGTTGGTATC CGCATATCTT GTCAGCAATG AAAGAGTTCG GTATTGATAC CCCCCGTCGC 
CAGGCTGCGT TTATTGCACA AATCGGGCAT GAAAGCAGGG ATTTTAAAGC ACTGGTCGAG 
TCATTTAATT ACAGCGTAGT GGGCTTAAAA ACCACCTTTA GTAGCCGTTT AACAGCCGGG 
CAATGCGAGA TGTTGGGCCG CCAACCTGGC GAGACCGTTG TCCCTATTGA ACGACAAAAA 
GCCATTGCCA ACCTTGTTTA CAGCAAACGC TATGGTAACA ACGCGCCCGG CGATGGCTGG 
AAATTCCGTG GCCGTGGACT GAAGCAAATC ACCTTTTTGG ATAATTATTA CCGTTGTGGC 
CATGCGCTAG AAATCGACTT GATCATCAAC CCAGATTTAC TGCTGCAAGA TGATTATGCC 
GCACGCTCTG CGGGTTGGTT CTGGTACGTA AACAACTGTA ACGAATATGC GGACAACGGT 
AGCTTTGTTC GCTTGACCAA AGTGATTAAC GGCGGCACTA ACGGCCTGGC TGACCGTCAG 
GCTCGGTTAT TAGTTGCCGA GCGTGTCCTA TGTCCATAA 

 

Protein sequence

MQISLSQFQL AASLSPALAS RWYPHILSAM KEFGIDTPRR QAAFIAQIGH ESRDFKALVE 
SFNYSVVGLK TTFSSRLTAG QCEMLGRQPG ETVVPIERQK AIANLVYSKR YGNNAPGDGW 
KFRGRGLKQI TFLDNYYRCG HALEIDLIIN PDLLLQDDYA ARSAGWFWYV NNCNEYADNG 
SFVRLTKVIN GGTNGLADRQ ARLLVAERVL CP