| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0181 |
|---|
| Symbol | |
|---|
| ID | 6089659 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 233187 |
|---|
| End bp | 233942 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641595241 |
|---|
| Product | D12 class N6 adenine-specific DNA methyltransferase |
|---|
| Protein accession | YP_001718947 |
|---|
| Protein GI | 170022442 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0338] Site-specific DNA methylase |
|---|
| TIGRFAM ID | [TIGR00571] DNA adenine methylase (dam) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCC CAATAATTCC CTGGGTTGGT GGTAAACGAC GGTTGGCAAA ACATATTTTG
CCGCTGTTCC CTGCACATAC ATGCTATATC GAGCCGTTTT GTGGGGGTGC AGCTCTATAT
TTTCTCAAAG AGACTTCTAA AGTAGAGGTT ATTAATGATG TTAATGGTGA GCTAATTAAC
CTTTATCGCG TCATTAAAAA CCATTTAGAA GAGTTTGTAA GGCAGTTTAA ATGGGCATTA
ACCAGCCGGC AAGTATTTGA GTGGACGAAA GCCACGCCGA CAGAGGTGCT CACTGACATA
CAGAGGGCGG CTCGGTTTTA CTATCTGCAA ACGACAGCCT TTGGCGGTAA GGTGGATGGT
CAGACATTTG GCACATCAAC TACAAGACCA ACAGGACTGA ACTTGTTGCG CCTTGAAGAA
ACGCTATCAG CGGCACACCT GAGGCTATCC CGCACAATGA TAGAACACAT GGGGTGGGCT
GATTGTGTAG AAAAATATGA CCGTCCACAT TCATTATTTT ACTTAGATCC ACCTTACTGG
CAGACCTGTG GCTACGGGGT TGAGTTCGGA CTTGATCAAT ATACCCAAAT GGCCCAGTTA
GCGCGTTCTA TTAAGGGCAG TATGATAATC TCAGTCAACG ATATCCCGGA GATGCGGGAC
GTCTTTAAGG GACTGCATAT GGATACTGTG AGCCTTAAAT ACTCATTAGG GGACAACAAA
AAGCAGGTGA GCGAGTTAAT CATCCGAAAT TTCTAG
|
|---|
| Protein sequence | MSTPIIPWVG GKRRLAKHIL PLFPAHTCYI EPFCGGAALY FLKETSKVEV INDVNGELIN
LYRVIKNHLE EFVRQFKWAL TSRQVFEWTK ATPTEVLTDI QRAARFYYLQ TTAFGGKVDG
QTFGTSTTRP TGLNLLRLEE TLSAAHLRLS RTMIEHMGWA DCVEKYDRPH SLFYLDPPYW
QTCGYGVEFG LDQYTQMAQL ARSIKGSMII SVNDIPEMRD VFKGLHMDTV SLKYSLGDNK
KQVSELIIRN F
|
|---|
| |