Gene YPK_0171 details

Gene Information

• Locus tag: YPK_0171
• Symbol: greB
• ID: 6088227
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: +
• Start bp: 222609
• End bp: 223124
• Gene Length: 516 bp
• Protein Length: 171 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 641595231
• Product: transcription elongation factor GreB
• Protein accession: YP_001718937
• Protein GI: 170022432
• COG category: [K] Transcription
• COG ID: [COG0782] Transcription elongation factor
• TIGRFAM ID: [TIGR01461] transcription elongation factor GreB

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAAAA GTAACTACAT TACCCGCGAA GGCTGGCAGG CGCTGGACCG TGAATTGCAT 
TATCTGTGGC GAGAAGAGCG CCCGGTCGTC ACTCAGGCGG TTTCTGAAGC CGCTGCTATG 
GGTGACCGTT CAGAAAATGC TGAATATATT TATGGAAAGA AGCGGCTGAG AGAAATCGAT 
CGCCGGGTAC GCTTTCTCGC CAAGCGCCTT GAAGTGCTGA AAATTGTTGA CCCCGATCCT 
CGCCAAGAAG GTAAAGTCTT TTTTGGGGCC TGGGTGCGGG TGGAAAATGA GCAAGAAGAG 
CAACGCATCT TCCGTTTGGT GGGGCCAGAT GAGTTTGACC CGGCCAAAAA ATGGATTTCA 
ATTGATTCAC CGGTCGCCCG TGCATTGATA GGGAAACAAG TCGATGACGA GGTCACCGTG 
CAAACGCCTA ATGGTGAGGC AACCTATTGG ATATTAGAGA TTCGTTATCG GCCATTTGAT 
GAAGATAGGC CATTTAATGA AGATATTGAT AATTAG 

 

Protein sequence

MAKSNYITRE GWQALDRELH YLWREERPVV TQAVSEAAAM GDRSENAEYI YGKKRLREID 
RRVRFLAKRL EVLKIVDPDP RQEGKVFFGA WVRVENEQEE QRIFRLVGPD EFDPAKKWIS 
IDSPVARALI GKQVDDEVTV QTPNGEATYW ILEIRYRPFD EDRPFNEDID N