Gene YPK_0157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0157 
Symbol 
ID6090104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp203394 
End bp204152 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content49% 
IMG OID641595217 
ProductDNA-binding transcriptional repressor GlpR 
Protein accessionYP_001718923 
Protein GI170022418 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1349] Transcriptional regulators of sugar metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGCAAA CGCAGCGGCA TGATGCGATT ATTGAGCTGG TACGCCTACA AGGTTATGTC 
AGCACTGAAG AGTTAGTGGA ACATTTTGCC GTTAGCCCGC AAACCATTCG GCGTGACTTA
AATGAGCTGG CCGATCAAAA CAAAATTCAT CGTCATCATG GTGGGGCGGC GCTACCGTCC
AGTTCGGTCA ACGCGGCTTA TAACGATCGT AAAGTGATGT GGTCGGAAGA AAAGGCGCGG
ATCGCCCAAC GCGTTGCTAG CCAGATCCCA GATGGCGCCA CGCTATTTAT TGATATTGGC
ACCACACCCG AAGCGGTCGC TCATGCGCTG ATGAATCATA AAGGTCTGCG AGTGGTCACC
AACAATCTGA ACGTTGCCAC ATTGCTGACC GCCAAAGAAG ACTTTCGCCT TATTCTGGCG
GGAGGCGAGG TCCGCACTCG CGATGGTGGG ATTATTGGCG AAGCGACCCT GGATTTTATT
TCTCAATTCC GTCTTGATTA CGGCATCCTC GGTATCAGTG GTATTGATAT GGACGGTTCA
TTACTGGAGT TTGATTACCA TGAAGTGCGC ACCAAGCGAG CGATTATTGA GAACTCCCGT
TGTGTGATGT TGGTAACCGA CCATTCTAAA TTTGGCCGTA ACGCGATGGT GAATTTAGGG
AACATGAATC TGATCGATTA TCTGTTTACC GATCAACAGC CACCAGCCAG TGTGATGAAA
ATCATTGAGC AGCATGAGGT TCAATTGGAG CTTTGTTAG
 
Protein sequence
MKQTQRHDAI IELVRLQGYV STEELVEHFA VSPQTIRRDL NELADQNKIH RHHGGAALPS 
SSVNAAYNDR KVMWSEEKAR IAQRVASQIP DGATLFIDIG TTPEAVAHAL MNHKGLRVVT
NNLNVATLLT AKEDFRLILA GGEVRTRDGG IIGEATLDFI SQFRLDYGIL GISGIDMDGS
LLEFDYHEVR TKRAIIENSR CVMLVTDHSK FGRNAMVNLG NMNLIDYLFT DQQPPASVMK
IIEQHEVQLE LC