| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0152 |
|---|
| Symbol | glpD |
|---|
| ID | 6089427 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 199169 |
|---|
| End bp | 200683 |
|---|
| Gene Length | 1515 bp |
|---|
| Protein Length | 504 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641595212 |
|---|
| Product | glycerol-3-phosphate dehydrogenase |
|---|
| Protein accession | YP_001718918 |
|---|
| Protein GI | 170022413 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACCA AAGACTTGAT CGTGATCGGT GGCGGTATTA ACGGTGCCGG TATCGCTGCG
GACGCTGCTG GGCGTGGCCT GTCGGTACTG CTGCTGGAAG CGCAAGACTT GGCCTGTGCT
ACGTCTTCCG CCAGTTCCAA ACTTATCCAT GGTGGCTTAC GCTATCTGGA ACATTATGAA
TTCCGCTTGG TAAGTGAAGC CTTGGCCGAG CGTGAAGTGT TACTGAAACT GGCACCGCAT
ATCGCATTCC CTATGCGCTT CCGCCTACCC CACCAGCCTC ATCTGCGCCC GGCATGGATG
ATCCGCACCG GCTTGTTCTT GTATGACCAT TTGGGCAAAC GTACCAGCCT GCCAGCCAGT
AAAGGGCTGC GTTTTGGGCC GGAATCTGTG TTAAAACCCG AGTTGGTGCG CGGTTTCGAA
TATTCTGACT GTTGGGTGGA TGATGCCCGC CTGGTGGTGC TGAATGCGCA GGAAGTGGTT
AAACACGGTG GTGAAGTCCG TACCCGTACC AAAGTGACCC GTGCCTGGCG TGAACAAGGC
CTATGGATGG TTGAAGCCCT TGATGTCAAT ACCGGCAAAA CCTTCACCTG GCGGGCTAAA
GGCTTAGTGA ATGCCACTGG CCCTTGGGTT AAACAGTTCT TCGACGATGG CCTAAAGCTC
AAATCACCTT ATGGCATCCG CCTAATTAAA GGCAGCCACA TTGTGGTGCC TCGGGTTCAT
AACCAACCGC AGGCGTATAT TCTGCAAAAT GAAGATCACC GTATCGTTTT CGTTATCCCT
TGGTTAGATG ACTATTCCAT CATCGGTACT ACCGACGTGG AATACCACGG CGATCCAAAA
GAGGTGAAAA TTGACGATCA GGAAATGACT TATCTGCTGA AAGTCTATAA CGACCACTTT
AAAAAACAGT TGGGTCGTGA CGATATCGTC TGGACCTACT CTGGTGTGCG CCCGCTATGC
GACGATGAAT CAGATTCACC GCAAGCCGTT ACCCGCGATT ACACGCTAGA TGTGGCCGAT
GAAGCGGGTC AGGCACCACT CCTGTCGGTC TTCGGCGGTA AACTCACCAC CTACCGTAAA
TTGGCAGAAC ATGCGCTGGA AAAACTGTCA GCGTACTACC CGAATGTCGG CCCAGCGTGG
ACTAAAACCG GTGCCTTGCC CGGTGGGGAT ATCGGCGGTA GCCGTGATAG CTATACCGTG
CAATTGCGCC ACCGCTATAA CTGGTTGCCG GAAGGGTTGG CCCGCCGCTA TACCCGTACC
TATGGTAGCC ACAGCGAGCT AATTTTAGCC AATGCGACCC GTCTTGAAAG CCTGGGTGAG
CACTTTGGTC ACGGCTTGTA TGAGGCTGAA TTGCGCTATT TGGTTGAGAA CGAGTGGGTC
GTTGAGCTGG ATGATGCTAT CTGGCGCCGT ACCAAATTAG GCATGGCCCT CAGCGATGAA
GAGAAACAGC GGGTAGCCCA GTGGCTGGCT GATGCGCACA CTGAAAAACA ACAGGCGCTG
CCGCTGGTTT CTTAA
|
|---|
| Protein sequence | METKDLIVIG GGINGAGIAA DAAGRGLSVL LLEAQDLACA TSSASSKLIH GGLRYLEHYE
FRLVSEALAE REVLLKLAPH IAFPMRFRLP HQPHLRPAWM IRTGLFLYDH LGKRTSLPAS
KGLRFGPESV LKPELVRGFE YSDCWVDDAR LVVLNAQEVV KHGGEVRTRT KVTRAWREQG
LWMVEALDVN TGKTFTWRAK GLVNATGPWV KQFFDDGLKL KSPYGIRLIK GSHIVVPRVH
NQPQAYILQN EDHRIVFVIP WLDDYSIIGT TDVEYHGDPK EVKIDDQEMT YLLKVYNDHF
KKQLGRDDIV WTYSGVRPLC DDESDSPQAV TRDYTLDVAD EAGQAPLLSV FGGKLTTYRK
LAEHALEKLS AYYPNVGPAW TKTGALPGGD IGGSRDSYTV QLRHRYNWLP EGLARRYTRT
YGSHSELILA NATRLESLGE HFGHGLYEAE LRYLVENEWV VELDDAIWRR TKLGMALSDE
EKQRVAQWLA DAHTEKQQAL PLVS
|
|---|
| |