Gene YPK_0128 details

Gene Information

• Locus tag: YPK_0128
• ID: 6090194
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: +
• Start bp: 156082
• End bp: 156765
• Gene Length: 684 bp
• Protein Length: 227 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 641595188
• Product: hypothetical protein
• Protein accession: YP_001718894
• Protein GI: 170022389
• COG category: [R] General function prediction only
• COG ID: [COG3822] ABC-type sugar transport system, auxiliary component

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACGCT CCGAGGTCAA CCAAATCCTT AAGCAGACCG GTCATTTCTT TGCCCGACAC 
CATATCCAGC TACCGCCATT TGCCCGTTTC ACGCCACAAA TATGGCAACA GCTTGACCCT 
AAAGCCTGGC AAGAACTGTT TGACCTGAAA CTCGGCTGGG ATATTACCGC ATTCGGCGGG 
AACCATTTTT TTACTCAGGG ATTAACGCTG TTCACCTTAC GCAACGGTTC GGTAAGCGGC 
ACGCCTTACC CTAAATGCTA CGCCGAAAAA ATCATGCACG TCCGCGAAGG CCAGGTGACA 
CCTATGCATT TTCACTGGCG TAAACAGGAA GATATCATCA ACCGTGGCGG CGGCAATCTT 
ATCGTCGAGC TATGGAATTC CGACGCGTTT GAACAAACGG AGAAGAGCGA TGTCACCGTG 
ACACTCGACG GCTGCCGCCA AACCCATGCG GCAGGCAGCC AGTTACGCTT ATCTCCCGGT 
GAAAGCATTT GCCTGGTGCC TGGGGTGTAC CACAGTTTCT GGGGCGAGGT AGGTTACGGT 
GAGGTGCTGG TCGGTGAGGT ATCGATGGTA AATGACGATG ACCACGACAA CCGATTTATG 
AAACCTCTTG AACGTTTTAA TTCGATTATT GAAGACGAAC CGGCTGAACT TGTGCTGTGT 
AATGAGTACT GCCGTTTCGT CTGA 

 

Protein sequence

MKRSEVNQIL KQTGHFFARH HIQLPPFARF TPQIWQQLDP KAWQELFDLK LGWDITAFGG 
NHFFTQGLTL FTLRNGSVSG TPYPKCYAEK IMHVREGQVT PMHFHWRKQE DIINRGGGNL 
IVELWNSDAF EQTEKSDVTV TLDGCRQTHA AGSQLRLSPG ESICLVPGVY HSFWGEVGYG 
EVLVGEVSMV NDDDHDNRFM KPLERFNSII EDEPAELVLC NEYCRFV