Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0125 |
Symbol | |
ID | 6091315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 152524 |
End bp | 154047 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641595185 |
Product | ABC transporter related |
Protein accession | YP_001718891 |
Protein GI | 170022386 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAG TCCCCCTCTT GGAGATGCGT AATATTACCA AGTCGTTTGG CAAATTTCAG GCGCTTAAAG GTGTCGATTT GGCGGTGTTT TCCGGCGAGA TCCACGCGTT GATGGGCGAA AACGGGGCGG GGAAAAGTAC CCTGATGAAG ATCCTTGCTG GCGCATATAC CACCACCAGC GGCGAGATCC TTATTGAGGG TAGGCCTTGG TCCATCAAAG GCCCAAAAGA TGCGCTGAAT GCAGGTATTA GTTTGATTTA CCAAGAGATG CAGCTCGCAC CTAACCTGAC CGTTGCGGAA AATATTTTCC TTGGCAGCGA GCTTTCCCGG GGAGGGCTGG TGCAGCGTAA AGAGATGGTG ATGCAGACCC AGGCGGTTAT CGACCGCCTC GGCGCTCAGT TTAAAGCCAG TGATTTAGTG ATGGGGCTTA CCATCGCCGA ACAACAGCAG GTCGAGATTG CTCGTGCACT TCATCGTAAC AGCCGCATTT TGGTGATGGA TGAACCCACA GCGGCGCTTT CTACTCGTGA AACGCATCGC CTATTCGAAC TTATTTTGCG GCTGCGCGAT GAGGGGATGG CCATTATCTA CATCAGCCAT CGTATGGCGG AAGTGTATGA ACTTTCTGAC CGTGTGAGCG TACTGCGCGA CGGGCAATAC GTCGGCAGCC TGATGCGCGC CAACCTCAAC GCCAACGAAC TGGTGCGCAT GATGGTGGGG CGTCCGCTTA GCGATCTGTT CAATAAAGAA CGGGATATTC CACTCGGTCA TTCACGCCTT AATGTTCATC ACCTGACGGA TGGTGCCAAA GTGCAGGCGG TGAGTTTACA GGTCCGTTCT GGTGAAATCG TTGGGTTAGC GGGGCTGGTG GGCGCAGGGC GTTCGGAGCT GGCGCAACTG ATTTTTGGCG TCCGCAAAGC CACCGGAGGA ACGATAGAGA TAGATGGCGT ACCGTTGGTC ATTCACTCCC CTCGTGAAGC CATTCGCCAC GGTATTGGTT TTCTGACCGA GAACCGCAAA GAGCAAGGGC TGTTTTTGGA ACTGGCCGCG CAGGACAACA TCACTATGGC AACCCTGGAG CGGGACGCCT GTTACGGCCT GCTCGATCGC AAAAAAGCCC GTGCTATTTC AGACGACGCC ATCAATCGGT TGAACATACG TGTACCTCAT GCGCAGGTGC GTGCCGGAGG CTTGTCCGGG GGTAACCAGC AAAAGCTGCT GATTTCCCGT TGGGTAGCGA TTAGCCCACG CATTCTTATC CTTGATGAGC CAACACGTGG AGTGGACGTC GGCGCTAAAA GCGAGATTTA CCGCATCATG AGCCAGATGG CGCGCGAGGG GGTGGCGATT TTGATGATTT CCAGTGAGTT GCCCGAGGTG GTAGGGATGA GCGACCGGGT GTACGTGATG CATGAAGGAC GTATTGCAGG GGAACTACAT CACCCTGATA TCACGCAGGA AAATATTATG ACGCTGGCAA CTGGCGTGAC CGAGGACCAT AAAAAAGAGG TTTACCATGA CTAA
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Protein sequence | MNKVPLLEMR NITKSFGKFQ ALKGVDLAVF SGEIHALMGE NGAGKSTLMK ILAGAYTTTS GEILIEGRPW SIKGPKDALN AGISLIYQEM QLAPNLTVAE NIFLGSELSR GGLVQRKEMV MQTQAVIDRL GAQFKASDLV MGLTIAEQQQ VEIARALHRN SRILVMDEPT AALSTRETHR LFELILRLRD EGMAIIYISH RMAEVYELSD RVSVLRDGQY VGSLMRANLN ANELVRMMVG RPLSDLFNKE RDIPLGHSRL NVHHLTDGAK VQAVSLQVRS GEIVGLAGLV GAGRSELAQL IFGVRKATGG TIEIDGVPLV IHSPREAIRH GIGFLTENRK EQGLFLELAA QDNITMATLE RDACYGLLDR KKARAISDDA INRLNIRVPH AQVRAGGLSG GNQQKLLISR WVAISPRILI LDEPTRGVDV GAKSEIYRIM SQMAREGVAI LMISSELPEV VGMSDRVYVM HEGRIAGELH HPDITQENIM TLATGVTEDH KKEVYHD
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