Gene YPK_0120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0120 
Symbol 
ID6089885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp145022 
End bp145468 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content47% 
IMG OID641595180 
ProductUspA domain-containing protein 
Protein accessionYP_001718886 
Protein GI170022381 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.792174 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTACA AACACATTCT GATTGCGGTT GACCTATCCC CGGAAAGCAA GGTATTGGTG 
GAAAAGGCGG TTTCCATGGC CAAACCGTAC AATGCCAAAG TTTCCCTGAT CCATGTTGAC
GTTAACTACT CAGATCTCTA TACCGGTCTG ATTGACGTTA ATCTCGGCGA TATGCAGAAG
CGTATTTCTG AAGAAACACA CAATGCATTG ACCGAGCTAT CACAAAATGC AGGCTACCCC
GTTGAGCAAA CGTTAAGCGG CAGCGGTGAT CTAGGCCAGG TTCTGGTTGA TGCCATTAAG
AAATATGATA TTGACCTGGT CTTGTGTGGT CATCATCAGG ATTTCTGGAG CAAGCTGATG
TCTTCAGCGC GCCAACTGAT CAATACCGTG CATGTCGATA TGCTTATTGT GCCATTGCGC
GATGACGACA ATGGCGAAGA CGACTAA
 
Protein sequence
MAYKHILIAV DLSPESKVLV EKAVSMAKPY NAKVSLIHVD VNYSDLYTGL IDVNLGDMQK 
RISEETHNAL TELSQNAGYP VEQTLSGSGD LGQVLVDAIK KYDIDLVLCG HHQDFWSKLM
SSARQLINTV HVDMLIVPLR DDDNGEDD