Gene YPK_0117 details

Gene Information

• Locus tag: YPK_0117
• ID: 6087264
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: +
• Start bp: 141015
• End bp: 141785
• Gene Length: 771 bp
• Protein Length: 256 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 641595177
• Product: putative methyltransferase
• Protein accession: YP_001718883
• Protein GI: 170022378

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTCACACG TCAGTATTTG TTTATTATCT GAAGCAGGCG CCGATCCCGG CGCCTTATCT 
ATTCTGGCTG ATCGCTGGGG GCTAGTCTCT GACGATCAGG CGGTGATGGC GTTGGTGCTG 
ACCGCTGAAC GGCTTGAACT GCGTAAGCGG GATGAGCCGA AACTTGGCGG CATCTATGTG 
GATTTCGTCT CTGGCACGCA GGCGCATCGG CGTAAATTTG GTGGTGGCCG TGGCGAAGCC 
GTCGCGAAAG CCGTGGGCAT CAAAAAAGGC TATCTCCCAC GGGTGGTGGA TGCCACCGCA 
GGCCTTGGGC GCGATGCCTT TGTTCTGGCG GCGTTAGGCT GCCAGGTGCA GATGCTGGAA 
CGTAACCCGG TGGTCGCTGC ATTACTGGAT GATGGTTTGC GCCGGGGCTA TCTGGATGCT 
GAAATCGGTC CGTGGCTACG TGAACGTCTG ACGTTATTAC ATGCCTCCAG TCTGACCGCG 
TTGGTGGCGA TTGAACCGTG CCCAGAGGTG GTTTATCTCG ATCCGATGTA CCCGCACCGG 
CAAAAAAGTG CGTTGGTTAA AAAAGAGATG CGGGTATTTC AATCATTGGT GGGGGCCGAT 
AATGATGCTG ATGGTTTGTT AGCCCCCGCC CGTGCGTTGG CCACCAAGCG AGTGGTGGTG 
AAACGCCCGG ATTATGCTGA GCCATTGGCT GGCGTGGCCG CTCAGGCGGC GGTTGTGACC 
AAGAGCCACC GTTTTGACAT ATACCCTTCA TCGGTGACGC CGCCGCGTTA G 

 

Protein sequence

MSHVSICLLS EAGADPGALS ILADRWGLVS DDQAVMALVL TAERLELRKR DEPKLGGIYV 
DFVSGTQAHR RKFGGGRGEA VAKAVGIKKG YLPRVVDATA GLGRDAFVLA ALGCQVQMLE 
RNPVVAALLD DGLRRGYLDA EIGPWLRERL TLLHASSLTA LVAIEPCPEV VYLDPMYPHR 
QKSALVKKEM RVFQSLVGAD NDADGLLAPA RALATKRVVV KRPDYAEPLA GVAAQAAVVT 
KSHRFDIYPS SVTPPR