Gene YPK_0111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0111 
Symbol 
ID6091058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp132347 
End bp133483 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content53% 
IMG OID641595171 
Productglycerate kinase 
Protein accessionYP_001718877 
Protein GI170022372 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1929] Glycerate kinase 
TIGRFAM ID[TIGR00045] glycerate kinase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTA TTATTGCTCC CGATTCATTT AAAGAAAGCC TCACCGCCAT GCAGGTTGCC 
GAGGCCATTG AGCAAGGCTT CAGCGAGATT TTCCCGCAGG CCGAATATAT AAAGCTGCCA
ATGGCCGATG GCGGCGAAGG TACCGTTGAA TCAATGGTTG CAGCCACTGG CGGAGAGTTA
GTTAATGTAG AGGTTACCGG CCCATTGGGT GCTCCGGTTA AGGCCTTTTA CGGTTGGATG
GGCGATGGCG AAACGGCGGT GATTGAAATG GCGGCGGCAT CTGGCCTGCA TTTAGTGGCA
CCAGAGCAGC GCAATCCACT GATTACCACC AGCTACGGTA CTGGCGAACT GATTTTGGCG
GCGCTGAATC ACGGGGCGCG CAAAATTATT CTCGGCATCG GAGGCAGTGC CACCAATGAT
GGCGGCGCAG GCATGATGCA AGCATTGGGC GTACAGCTTA GTGATCAACA AGGTAAAGCG
CTCACGGTTG GCGGGGCGGC ATTAGTGCAA TTGGTCGATA TTGATCTCAG CCAGTTGGAT
GATCGTTTGG CACAAACCGA TATTCTGGTC GCCTGCGATG TAGATAACCC ATTGTGTGGT
GCGAAAGGCG CATCGGCAGT GTTCGGTCCA CAGAAAGGGG CGACGCCAGA ACGCGTGCAA
CAATTGGACG CGGCGTTGCA GCATTATGGT GAGAAAATCG AGCAAGTTAC TGGGAAATCC
GTCATTAACG TGGCCGGTGC CGGTGCTGCT GGCGGTATGG GCGCGGCGCT GTTCGGTTTA
CTGAATGCAC GGTTACAACC GGGGATTGAG ATAGTCACCG AAGCGCTAAA ATTAGCGGCT
GCCGTGCAAG AGGCTGATTT AGTCATTACC GGAGAAGGGC GCATCGATAG CCAAACCATT
TACGGTAAAA CGCCGGTCGG GGTGGCGCGA GTCGCGAAGC GTTTTGATAT TCCTGTCATT
GCTATCGCTG GCAGCATGGC ACCGGACTAT GAGGTGGTAC ATCAACATGG GTTAGATGCG
GTATTTTCAG TTCTCAACCA TATTCAAACG CTACCAGAAG CACTGGAAGA GGCGAGTGAT
AATATTCGTA TCACGGCGCG TAACGTTGCT GCTGTCTGGA AAATGGGCAG AAGTTAA
 
Protein sequence
MKIIIAPDSF KESLTAMQVA EAIEQGFSEI FPQAEYIKLP MADGGEGTVE SMVAATGGEL 
VNVEVTGPLG APVKAFYGWM GDGETAVIEM AAASGLHLVA PEQRNPLITT SYGTGELILA
ALNHGARKII LGIGGSATND GGAGMMQALG VQLSDQQGKA LTVGGAALVQ LVDIDLSQLD
DRLAQTDILV ACDVDNPLCG AKGASAVFGP QKGATPERVQ QLDAALQHYG EKIEQVTGKS
VINVAGAGAA GGMGAALFGL LNARLQPGIE IVTEALKLAA AVQEADLVIT GEGRIDSQTI
YGKTPVGVAR VAKRFDIPVI AIAGSMAPDY EVVHQHGLDA VFSVLNHIQT LPEALEEASD
NIRITARNVA AVWKMGRS