| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0106 |
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| Symbol | |
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| ID | 6088334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 125074 |
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| End bp | 126174 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641595166 |
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| Product | ribonuclease |
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| Protein accession | YP_001718872 |
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| Protein GI | 170022367 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1295] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN)
[TIGR00766] ribonuclease, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGAACG CACCGAAAGA TAAAGTCACA CCACAGGTAT CCAGTCAATC CACAGCCCCA
CTGGCTGTCG GGATTAAAAC CGGCAAAAAA GCCATCTCTC ATATGGCCCG CCTCAGTGAT
CGCATTAGAG CCTATCCCGC TATCGCCCAT ATTATTCGTG CAACAGATCG TTTTAATGAC
CGGTTAGGGA GCCAATTCGG TGCCGCGATT ACTTACTTTT CATTTTTGTC ACTGATCCCC
ATTTTGATGG TCTCTTTTGC TATGGTCGGT TTTGTATTAG CGTCAAATCC CGATCTGTTG
GCTGAATTAA TTAACAAAAT TGTGAATAGC ATCAGTGACC CGGCACTGGC CACCACACTT
AAAAATACGG TGAATACCGC AATCCAGCAA CGCACCACCG TTGGGCTGAC CGGCTTAGCC
ATTGCGCTTT ATTCCGGGAT CAGTTGGATA GGGAACCTGC GCGAAGCGAT TCGGGCGCAA
TCACGTGATG TCTGGGAACG TAATCCGCAA GATAAGGAAA AATTCTATTA CCGCTATGCC
CGGGATTTTA TCTCACTGAT TGGGTTAGTG GTGGCGTTGA TTATCACACT CTCACTGACC
TCCATTGCCG GTGCTGCCCA AGCGGCGATC GTCAATGCGT TAGGTCTGGG GGGCATTGAA
TGGTTACGCC CAGCCATGAC GTTAATCGCG CTATCAATTT CTATTGCCGC TAACTACCTG
TTATTTTTAT GGATATTCTG GATATTACCG CGGAATAAGC CGAAGAAAAA AGCGCTGTTA
CGCGGAGCCC TCATTGCCGC TATCGGTTTT GAAGTGATTA AATTTATCAT GACCATGATG
CTGCCGCGCC TCGCCAGTTC ACCGTCTGGC GCAGCCTTTG GCTCGGTGAT TGGTTTAATG
GCTTTCTTCT ACTTTTTTGC CCGCCTAACC TTATTCTGTG CGGCTTGGAT AGCCACTGCC
CATGATGTAG CGGACAACCG TGTTGAGGGC AAAGACATTA TTGATGATAA AGACATTATT
GAGGATAAAG ACATTGAGGA TAAAGATATT GAGGACCAAA ACGTAGAAGA CAAGAGTTTA
CCAACACGTG GAGAAAAGTA A
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| Protein sequence | MPNAPKDKVT PQVSSQSTAP LAVGIKTGKK AISHMARLSD RIRAYPAIAH IIRATDRFND
RLGSQFGAAI TYFSFLSLIP ILMVSFAMVG FVLASNPDLL AELINKIVNS ISDPALATTL
KNTVNTAIQQ RTTVGLTGLA IALYSGISWI GNLREAIRAQ SRDVWERNPQ DKEKFYYRYA
RDFISLIGLV VALIITLSLT SIAGAAQAAI VNALGLGGIE WLRPAMTLIA LSISIAANYL
LFLWIFWILP RNKPKKKALL RGALIAAIGF EVIKFIMTMM LPRLASSPSG AAFGSVIGLM
AFFYFFARLT LFCAAWIATA HDVADNRVEG KDIIDDKDII EDKDIEDKDI EDQNVEDKSL
PTRGEK
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