| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0104 |
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| Symbol | |
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| ID | 6088099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 122049 |
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| End bp | 124268 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641595164 |
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| Product | AsmA family protein |
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| Protein accession | YP_001718870 |
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| Protein GI | 170022365 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAGAA CCGGAAAAGT ATTGGTGGGC GTCAGTGGGT TTATCCTGTT GTCATTGGTG
GCGGCGGTGA TATTTGTCGC CTCTTTTGAC TGGAATCGCT TGAAGCCAAC AATTAACCAA
AAAGTCTCCG CCGAGTTGCA ACGGCCTTTT GCCATTCGTG GCAATTTGAG TGTGGATTGG
TCACGAGAAG GCGAAGGTCC TGGCTGGCGC GGTTGGATCC CCTGGCCGCA TATCCATGCG
GAAGATTTGG TCTTGGGTAA CCCAACGACG TTAATCAGCA CACAAGAGAG CCGTGACGCT
CAATCAACAC AAGGCACGCC GCTCTCCGAC GCGTTTCCCA CCGGAGAGGG AGAGATGGTG
ACGCTTAAGC GAATCGACGC CAGCATTGCT CCGCTGTCAT TATTGAACAA AGAAGTTCGT
ATCCCCCGCC TTTGGCTGAC GCAGCCAGAC ATTCATTTGC AACGCCTGGC GAATGGCAAT
AACAACTGGA CGTTTAATCT GACCAATACC TCCACGGATA GCTCGTCTTG GTCAGTGGAT
ATCGGCGATA TTATTTTTGA TCGCGGTGAG ATAACGCTGA AAGATGCCAT CCTGCAAGCT
GATTTACTCG CGGTGATTGA TCCGCTGGCT AAAGCGTTGC CGTTCGCACA AGTGACCGGT
GTCCGTCGCG GGGCCAGTAT TAATTCGGTG ACCAGCACAC ATTCGGCAAA CACGACGACA
TCATCGGTCA CGACGACATC AGTGGTCACG ACTACAGCCA CGGCCACGAC TAACCCTGTG
ACAGAGATAG AGACGGTAAA AAGCACGACT CCAGATTACC TCTTCGGCTG GAAAGTAGAA
GGTCAGTATC AGGGGCAGCC CTTAGTGGGC AGTGGGAAAA TAGGGGGCAT GATATCAATG
AATGACGCGA ATGTGCCGTT CCCTCTGCAA GCGGATATGC GTTACGGTTC TACTCAGGTG
GCCGTCGTCG GGACCTTAAC CGATCCCGGA AATCTGGCGG GGCTGGATCT GCAATTGGTC
TTATCCGGGA CCAGTCTGGA TAACCTCTAT CCATTGCTCG ATGTCGTACT GCCTGCCACC
CCGCCTTATC AGACCGAGGG TCATCTGAGT GCTCGCCTAA AACAAGCAGG GGGCGCGGTT
TATCATTATG AAAATTTTAA TGGGAAGATT GGTGACAGTG ATATTCACGG TGACCTGACG
TATACCGACA GCCAGCCCCG GCCGAAATTA GCCGGTCAGG TCGATTCGGA AAAATTACGT
TTTACCGATT TGGCTCCGCT GATCGGGGCC GATTCCAATC AGGAAAAAGC CCTACGAGGT
GAACGGAATC GGCAGCCGGG CAATAAGATC CTGCCGACAG AAACGTTTGA TACCAAAAGT
TGGGGAGTGA TGGACGCGGA TGTCACTTAT ACGGCTAAGC GTATTGAACG GGATAAGTCA
TTACCGCTAA GTGATCTGTA CACCCATGTC GTCTTAAAAG AGGGGACGTT ACTGCTCGAC
CCGCTGCGGT TTGGGATGGC GGAAGGGGAT CTGGCTGCAA CTTTGCGCCT CGATAGTCAC
CAAACCCCGA TGCATGGCAA GGTTGATTTG CATGTCCGGC GCATACAATT AAAAGCCTTG
CTGCCACAGG TACAGGCGAT GCGGAGCAGC CTGGGGCGCT TGAGTGGTGA TGCCTCCTTT
ACCGCAGCAG GCAACTCGGT TGCTGGCCTG TTAGCAACCA GCAACGGTAA CGTGCGCCTG
CTACTGAGCC AGGGGCAGAT CAGCCGTAGC CTGATGGAGT TACTCGGCCT GAATGTGGGT
AACTATCTGG TGGCGAAGCT GTTTGGTGAT GATACGGTGA AAATTAACTG TGCGGCGGCA
GATATTACGT TGCGTAATGG GGTGGCGACG CCGAACGTGT TTGTCTTCGA TACTGAAAAT
GCCATTATCA ATATTACCGG TAATGCTAAT TTTGCTACCG AGCGGCTGAA TTTATCCATC
GATCCTGAAA GCAAAGGGCT ACGTATTCTG ACCCTGCGCT CGCCACTGTA TGTCAAAGGG
ACCTTTAAAC GCCCCGATGT GGGGGTGAAA ACCGGAGCGT TGATTGCCCG AGGTGCCGTT
GCGGCAGCAC TGGGGGTGGC ATTAACGCCG GCAGCGGCAT TACTGGCACT GATCTCCCCC
AGTGAAGGTG AAGAGAATCA GTGCGCACCG TTACTGCGAA AAATGCAGCA AAAGAAATAA
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| Protein sequence | MTRTGKVLVG VSGFILLSLV AAVIFVASFD WNRLKPTINQ KVSAELQRPF AIRGNLSVDW
SREGEGPGWR GWIPWPHIHA EDLVLGNPTT LISTQESRDA QSTQGTPLSD AFPTGEGEMV
TLKRIDASIA PLSLLNKEVR IPRLWLTQPD IHLQRLANGN NNWTFNLTNT STDSSSWSVD
IGDIIFDRGE ITLKDAILQA DLLAVIDPLA KALPFAQVTG VRRGASINSV TSTHSANTTT
SSVTTTSVVT TTATATTNPV TEIETVKSTT PDYLFGWKVE GQYQGQPLVG SGKIGGMISM
NDANVPFPLQ ADMRYGSTQV AVVGTLTDPG NLAGLDLQLV LSGTSLDNLY PLLDVVLPAT
PPYQTEGHLS ARLKQAGGAV YHYENFNGKI GDSDIHGDLT YTDSQPRPKL AGQVDSEKLR
FTDLAPLIGA DSNQEKALRG ERNRQPGNKI LPTETFDTKS WGVMDADVTY TAKRIERDKS
LPLSDLYTHV VLKEGTLLLD PLRFGMAEGD LAATLRLDSH QTPMHGKVDL HVRRIQLKAL
LPQVQAMRSS LGRLSGDASF TAAGNSVAGL LATSNGNVRL LLSQGQISRS LMELLGLNVG
NYLVAKLFGD DTVKINCAAA DITLRNGVAT PNVFVFDTEN AIINITGNAN FATERLNLSI
DPESKGLRIL TLRSPLYVKG TFKRPDVGVK TGALIARGAV AAALGVALTP AAALLALISP
SEGEENQCAP LLRKMQQKK
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