| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0086 |
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| Symbol | |
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| ID | 6087446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 99670 |
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| End bp | 101433 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641595146 |
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| Product | polypeptide-transport-associated domain-containing protein |
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| Protein accession | YP_001718852 |
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| Protein GI | 170022347 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATTTA AAATAAATGT GAGGTGGAGG GATAAAATTG GAGATTTTTG GTGGGGGATA
TTGTGCCTAT TATATCTTCA AATTATGATT GGGATGCTTC CGTTTAAAGT TTTTGCTGAA
ATGGCGTTGC CAGAAATGGA CCTGCTTGAA ATGGATATAG CCGAGCCGCA GATCCCAAAT
AGTATTATTC CTCCTCTATC ACATGCTCAA CTGGCCAGTG AACCGGTTCT GCCAGAGAAT
CTTTATAATG ATGAAGTACA ATGTGTAGCA ATTAATAATG TCGAATTGAT TAATCTTGAT
GCTTTCCCAA ATGCAGCTCA CTTAAAAGAA AAGGCTGAAG AAGCTCACGG GCGTTGCTTG
GGGGAACAGG GGCTGTCAGT GCTTGTGGCT AACTTACAGC AACAATTAGT GGTTGATGGC
TATATCACGT CTCGTGTGGT TTTTGTCGAT GACAGTGAGC GTGACGGTAC TTTAATGCTG
AAATTAATGC CCGGCAGGAT TGAGGATATC AGGCATCATC AAGATAGCGT CGGCAATGCT
CATCTCAGCT CCCTTTTCCC CGGTAAACGT GGTGATTTGG TTAATTTACG CCATCTTGAG
CAAGGATTAG AAAACTTGCA GCGTTTGCCT TCAGTGAATG CCACCCTGGA TGTCGAATTA
AACCGGGAAG ATTTAAGCAG CCAGATTATC GTGAATCGCC AGCAATCACG TCTCTGGCGT
ATTAATGCCT ACCTTGATGA TGCGGGGCAT GATGCCGTTG GCCGCTATCG TACGGGCCTG
ATATTGTCTT TTGATAATCC ATTATCCCGT TATAACCCCT TGTCTCTCAG TGATTTACTC
TACTTCTCTG TTAACCGTGA CCTTGATAGC CAACCCGATA AAGGGCACAA CAGCTACGGG
GTTCATTATT CTGTCCCGTA TGGCAACTGG CTATTTAGCA TGACGGGCAA TCAAGGTGAG
CGTTATCAAT CGTTCTCTTT TGCCGGTAAA AGACTTGCCG GTAAAAAATT TGGCTATCGT
TCCCATTGGT CTGTATTGGA TACACAAATT CAACATTTAC TCACCCGTGG AGTAAATTAT
AAAACAGTGG GTTATGCCGG GGTGTTAATT CGTCAGTCTG CCAGTTTTTG GACCCATCGG
GAGATAGATA TTCAGCGGTT CAATACCACG GACTGGCAGC TAGGGATTGA GCATCTACAT
TACATGCCAT GGGCGACTTT CAGAGGGGGG GTTCGTTATC AACAGGGGGC TTCATGGTTT
GGTGCCCAAC CTATTCCCGG TAAAATGAGC ACTGCACCGG CGAGGTTGGT CGATATCACC
AGCTCACTGG ATATCCCTTT TAAGATCGGA ACACAGTCCT TCCAGTATCG GCCCGCTTTC
AGCCAGCAAC ATACCTACTC GGATATTAGT TCACTGGATA AATTTACGAT TGGTGGCAGG
AGTTCAGTGC GAGGTTTTAA TGAGAATAAC GCTCTGACGG GGTCGCGGGG GTGGTCTCTA
AAAAATGATA TTTCATGGAT CAGCCCGATA CCCGGCCAGA CATTCGTGGG CCAGCAATTC
TATATCGGCA TGGATTATGG TGAGGTGAGT GAGCAGGGCC AACCATTTCT TTTGGGCGAG
CGTTTAGCGG GGGCCGTGGT AGGGACTCGT GGAAATTATC ATGCGTTTGG TTACGATTTT
AATGTCGGCG TGCCGATAAC CAAACCCGCT GAATTTGATG CTGATCCGTT GGTTTTTGGG
TTTACGCTAA CTTGGCAATA TTAG
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| Protein sequence | MTFKINVRWR DKIGDFWWGI LCLLYLQIMI GMLPFKVFAE MALPEMDLLE MDIAEPQIPN
SIIPPLSHAQ LASEPVLPEN LYNDEVQCVA INNVELINLD AFPNAAHLKE KAEEAHGRCL
GEQGLSVLVA NLQQQLVVDG YITSRVVFVD DSERDGTLML KLMPGRIEDI RHHQDSVGNA
HLSSLFPGKR GDLVNLRHLE QGLENLQRLP SVNATLDVEL NREDLSSQII VNRQQSRLWR
INAYLDDAGH DAVGRYRTGL ILSFDNPLSR YNPLSLSDLL YFSVNRDLDS QPDKGHNSYG
VHYSVPYGNW LFSMTGNQGE RYQSFSFAGK RLAGKKFGYR SHWSVLDTQI QHLLTRGVNY
KTVGYAGVLI RQSASFWTHR EIDIQRFNTT DWQLGIEHLH YMPWATFRGG VRYQQGASWF
GAQPIPGKMS TAPARLVDIT SSLDIPFKIG TQSFQYRPAF SQQHTYSDIS SLDKFTIGGR
SSVRGFNENN ALTGSRGWSL KNDISWISPI PGQTFVGQQF YIGMDYGEVS EQGQPFLLGE
RLAGAVVGTR GNYHAFGYDF NVGVPITKPA EFDADPLVFG FTLTWQY
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