| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0085 |
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| Symbol | |
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| ID | 6087323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 98170 |
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| End bp | 99561 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641595145 |
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| Product | filamentous haemagglutinin outer membrane protein |
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| Protein accession | YP_001718851 |
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| Protein GI | 170022346 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01731] adhesin HecA family 20-residue repeat (two copies)
[TIGR01901] filamentous haemagglutinin family N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.741703 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTGA CATATATTAA AACGAAACAG GGGTTGTCTA TATTACCTCT CTCTATCATA
TTGTCGCTCT ATGGGAGCTC GGTTGCTTAT GCTGATAATA TTATTCCTGA TATACAGGCC
CCAGCGGGAC AGCAAGCGGA AGTCTCTATT ATAGAAACAC CGCCCAGTAC ATGCCGAGCG
CTTACCTCTT ACTGTATCGG TATGACAGAG ACTGTCGTTA ATATTCAAGC GCCTGATGAA
AATGGGTTAT CACATAACAA GTATTCTAAA TTTGATGTGG TCGCTAATGG CTTGTTCGAT
GTCACGACAC TCAATAATCG CTTAGCTCAA GAGGTTAATG GCAACTCTTT TTTACAAGAT
AAATCGGCAA CCATTATATT AAATGAAGTC AACTCATCAC ATGCCAGTCT ATTAGATGGG
AATCTCCGTG TTGACGGGGG AAATGCGCAT ATTATTATTG CCAATCCAGC AGGTATTAAT
TGTCGAGGGT GCTCTTTTAC TAATGCCTCT CATGTGACAT TGACGACAGG TACGCCATCT
TTTTCTGATA ATAAACTAAA CAGTTTTATT GTTGAGCAGG GAAATATCAA TATTGAAAAA
AATCCCTCTT ACTATATGAG AACAGGTTTA CGGTATAAGG GGGCAGACAA GACTTATCTT
GATCTATTCG CAGACACTAT TACGGTTAGT GGTGAGATCA ATGCGGACGA TGGCTATATT
GTCACGGGAA AAAATAAAGT GGGTTTCTCT TTGCCTGGGC AACCATTGCA AGTGTCGCGT
TTAGGCAATG AAAATACACC AGTACCAGGT ACGGTTAGTT TGGATGTCAG CGAAATTGGG
GGAATGTACA CCAATAAAAT TCGTATCCAT GCAACCGATG GCACGATTAA AAATAAGGGG
GCAATACGCG CGAACGATAC ACTAAGCCTC AGTTCTGCAG CCAATATAGA TAACAGTAAT
GGGAATATAT CAGGGAAAAT GGTGTTACTG AGTAGCGAGG GTGTTATAAA TAACTCTGGT
GGCACAATAT TAAATAATGG TGAGTATGAT TTATTACCTT CTCAAGGTAT TAAAATAACA
TCTCGTGGCT TAAATAATGA AGGTGGAAAA ATAGAGTATA AAAATGGTAG CGTTGAAATA
GCGACAGTTA ACACCATCAA AAATGGTAAG GGTACAATTA AAGCAACATC AACGCAAGGG
CGGGTAAGAA TAAAACTTCA TAGTAATAAC CTTAATAATA CTGGAGGGAG TATTATTTCT
TCAGGGAAAA TAGAGGGTAA AGTTAATAAC ATACGAAACA ATAGAGGGGC TATTATTGGG
TTAGGTGGAG TGGATTTGAA TGAAACTGTT TTAATTAATG ATACCGGTAA AATAATTTCT
GATTTTAATT AA
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| Protein sequence | MKLTYIKTKQ GLSILPLSII LSLYGSSVAY ADNIIPDIQA PAGQQAEVSI IETPPSTCRA
LTSYCIGMTE TVVNIQAPDE NGLSHNKYSK FDVVANGLFD VTTLNNRLAQ EVNGNSFLQD
KSATIILNEV NSSHASLLDG NLRVDGGNAH IIIANPAGIN CRGCSFTNAS HVTLTTGTPS
FSDNKLNSFI VEQGNINIEK NPSYYMRTGL RYKGADKTYL DLFADTITVS GEINADDGYI
VTGKNKVGFS LPGQPLQVSR LGNENTPVPG TVSLDVSEIG GMYTNKIRIH ATDGTIKNKG
AIRANDTLSL SSAANIDNSN GNISGKMVLL SSEGVINNSG GTILNNGEYD LLPSQGIKIT
SRGLNNEGGK IEYKNGSVEI ATVNTIKNGK GTIKATSTQG RVRIKLHSNN LNNTGGSIIS
SGKIEGKVNN IRNNRGAIIG LGGVDLNETV LINDTGKIIS DFN
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