| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0083 |
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| Symbol | |
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| ID | 6088247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 96333 |
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| End bp | 97664 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641595143 |
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| Product | regulatory protein UhpC |
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| Protein accession | YP_001718850 |
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| Protein GI | 170022345 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | [TIGR00881] phosphoglycerate transporter family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.644662 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGGTTTT TCCTCAAAAG TCGCGATAAC GTACCGCCAG TAACGGATCA AACACAAATT
GATTCATCCT ATAAGTATTG GCGTATCCAA TTAATGTGGA CGATGTATAT CGGCTACGCT
GCGTTTTATT TCACTCGTAA AAGTTTCAAT TTTATTATGC CTGCTATGCT CACGGATCTA
GGGCTGAGCA TGTCTGATGT CGGGATTTTA GGCACGCTGT TTTACATCAC TTACGGCTGC
TCTAAATTTG TCTCTGGGAT GATCAGCGAT CGCTCAAATC CGCGTTATTT TATGGGGATC
GGGTTGGTCA TGACGGGGAT TATTAATATC CTGTTTGGCA TGAGCTCATC ACTTTTGGTC
CTTGGCGCCT TGTGGATCCT CAATGCGTTC TTCCAAGGTT GGGGCTGGCC ACCATGTTCT
AAAATATTGA CCAGTTGGTA CTCGCGTTCT GAACGTGGTG GCTGGTGGGC TATCTGGAAC
ACCTCACATA ACTTTGGCGG GGCGCTGATC CCCTTGCTCG TCGGGGTGAT TACTCTGCAC
TTTAGCTGGC GCTACGGGAT GATCATCCCC GGAATTATAG GTGTGGTGAT TGGTTTGCTG
ATGTGTTGGC GTCTGCGAGA TAAGCCAAGC ACCATGGGCC TACCAAGTGT GGGTAAATGG
CGCAATGATG CGATGGAGCT GATCCAGGAA TCCGAAGGCC AGGGGCTGTC TAATAAAGAA
ATTGTGAAGC GTTATGTCTT AACCAATAAA TATATTTGGT TGTTAGCCGT TTCCTATGTG
CTGGTTTATA TCGTTCGAAC CGCGATTAAT GACTGGGGTA ACCTCTATCT GACCCAAGAG
AAAGGTTATT CGTTGCTGAC CGCTAACTCT GCAATTTCAT TATTTGAAGT GGGTGGATTT
ATTGGTTCAT TGGTCGCGGG TTGGGGTTCT GATAAGTGGT TCCGTGGCAA TCGTGGGCCG
ATGAACCTGA TTTTTGCTAT TGGTATCTTC CTTTCAGTTG CATCACTGTG GACGTTGCCA
AGCATCAGTT TTGTCTTACA GGCAGGCTGC TTCTTTGCGA TTGGTTTCTT TATTTTCGGG
CCACAAATGC TGATTGGTAT GGCTGCTGCT GAGTGCTCTC ATAAGGATGC CGCTGGCGCT
GCAACCGGCT TTGTTGGGCT ATTTGCCTAT TTAGGGGCGG CTTTATCGGG TTACCCTATC
GCTCGCGTCA TGGAAATCTG GCATTGGAAT GGTTTCTTTG TGGTTATCTC TGTGGCGGCA
TGTTTATCTG CTTTCTTCTT ATTGCCATTC CTGCGGGCGC AATCGCCGCA GTTAAAGCAA
GCGACAACCT GA
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| Protein sequence | MWFFLKSRDN VPPVTDQTQI DSSYKYWRIQ LMWTMYIGYA AFYFTRKSFN FIMPAMLTDL
GLSMSDVGIL GTLFYITYGC SKFVSGMISD RSNPRYFMGI GLVMTGIINI LFGMSSSLLV
LGALWILNAF FQGWGWPPCS KILTSWYSRS ERGGWWAIWN TSHNFGGALI PLLVGVITLH
FSWRYGMIIP GIIGVVIGLL MCWRLRDKPS TMGLPSVGKW RNDAMELIQE SEGQGLSNKE
IVKRYVLTNK YIWLLAVSYV LVYIVRTAIN DWGNLYLTQE KGYSLLTANS AISLFEVGGF
IGSLVAGWGS DKWFRGNRGP MNLIFAIGIF LSVASLWTLP SISFVLQAGC FFAIGFFIFG
PQMLIGMAAA ECSHKDAAGA ATGFVGLFAY LGAALSGYPI ARVMEIWHWN GFFVVISVAA
CLSAFFLLPF LRAQSPQLKQ ATT
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