Gene YPK_0078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0078 
Symbol 
ID6090950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp88470 
End bp89873 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content49% 
IMG OID641595138 
Productamino acid permease-associated region 
Protein accessionYP_001718845 
Protein GI170022340 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1113] Gamma-aminobutyrate permease and related permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAATG ATTCATCCAC GCTCAAGCGC GGCCTTAGTG CACGGCATAT CCGGTTTATG 
GCATTAGGTT CTGCCATTGG TACTGGCCTA TTTTATGGTT CGGCTGAGGC AATCCGTCTG
GCGGGGCCTG CAGTGTTATT AGCTTATTTG ATTGGCGGTG CGGCAGTCTT TATGGTGATG
CGAGCCTTGG GCGAAATGGC CGTACATGAC CCCGTGGCCG GCTCTTTTGG TCACTATGCC
AGCCGTTATC TGGGGCCATT GGCGGGGTTC CTGACGGGCT GGACCTATAC CTTTGAAATG
GTTGTTGTGG CACTGGCTGA TGTTACCGCT TTTGGTATTT ATATGGGGCT GTGGTTTCCT
GATGCGCCCC AATGGGTATG GGTGCTAAGT ATCATTTTCT TTATCGGTGC GCTGAATCTA
TGTTCAGTGA AAGTCTTTGG TGAAATGGAG TTCTGGCTCT CGTTGCTAAA AGTGGCTGCC
ATTATCGCCA TGATTGCCGC AGGTTTGGGC ATTATGATGT TTGGTTTCGG GGCGGGGCAT
GACAGCACAG GCGTCAGTAA TTTATGGGCT CATCAAGGGT TTATGCCAAA TGGGATCACG
GGGGTGATTG CATCATTTGC TGTAGTGATG TTTGCTTTTG GGGGAATTGA AATTATTGGG
GTGACGGCCA GTGAAGCGAA GGATCCGGGA AAGGTATTAC CACGAGCCAT CAATACAGTG
CCAATACGTA TTCTATTGTT CTATGTTTTG ACCCTGTTTG TCCTGATGGC TATCTATCCG
TGGAATAGTA TTGGGCAAAA TGGCAGCCCC TTTGTGGAGA TTTTTAGTAG TTTAGGCATA
AACTCTGCCG CTAATATTCT TAATTTGGTG GTAATAACCG CTGCAATTTC AGCGATTAAC
AGTGATATTT ACGGTGCTGG CCGTATGATG TACGGCCTCG CGCAGGAAGG ATTGGCCCCT
AAGAGCTTCA GTCGATTGAC ACGTAATGGC GTGCCCTATA TGACTATCTT GGTGATGGCG
ATTACGCTGC TGTGCGGTGT GGTATTGAAT TACCTTATCC CGAAAAACGT GTTCTTGGTT
ATTGCATCGA TCGCCACTTT TGCAACCGTC TGGGTGTGGC TAATGATTCT GGTATCACAA
GTGGCTATGC GCCGCTCAAT GAGCAAAGCA CAAGTCGCTC GGCTGGCATT CCCCGTGCCA
TTTTGGCCGC TAGCGCCTAT CCTTACCATT CTCTTTATGG CCTTTATTAT TGCTGTTTTA
GGTTACTTCC CTGCGACTCG TATTGCGATG TATGTCGGCC TGGCGTGGGT GGCATTAATG
ACACTGGCGT GGTGGATTTG GTTACGTAAA GCCCCTTCAT GCGTTATTCA AGAGCGGGCG
AAAAGCAGTG AGATGCCATC GTAA
 
Protein sequence
MKNDSSTLKR GLSARHIRFM ALGSAIGTGL FYGSAEAIRL AGPAVLLAYL IGGAAVFMVM 
RALGEMAVHD PVAGSFGHYA SRYLGPLAGF LTGWTYTFEM VVVALADVTA FGIYMGLWFP
DAPQWVWVLS IIFFIGALNL CSVKVFGEME FWLSLLKVAA IIAMIAAGLG IMMFGFGAGH
DSTGVSNLWA HQGFMPNGIT GVIASFAVVM FAFGGIEIIG VTASEAKDPG KVLPRAINTV
PIRILLFYVL TLFVLMAIYP WNSIGQNGSP FVEIFSSLGI NSAANILNLV VITAAISAIN
SDIYGAGRMM YGLAQEGLAP KSFSRLTRNG VPYMTILVMA ITLLCGVVLN YLIPKNVFLV
IASIATFATV WVWLMILVSQ VAMRRSMSKA QVARLAFPVP FWPLAPILTI LFMAFIIAVL
GYFPATRIAM YVGLAWVALM TLAWWIWLRK APSCVIQERA KSSEMPS