Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0056 |
Symbol | |
ID | 6090616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 62348 |
End bp | 63667 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641595115 |
Product | xylose isomerase |
Protein accession | YP_001718823 |
Protein GI | 170022318 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2115] Xylose isomerase |
TIGRFAM ID | [TIGR02630] xylose isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAATCTT ATTTTAATGA ATTAGAACAA GTGCGCTACG AAGGTAGCCA GAGCACGAAT CCTCTGGCGT TTCATCATTA CAACCCGGAT GAAATGATCC TTGGTAAGCG AATGGCTGAC CATCTGCGGT TTGCCGCCTG TTACTGGCAT ACCTTCTGCT GGGGGGGGGC CGATATGTTC GGTGCCAATG CTTTTGATCG CCCATGGCAA CAACCTGGGG ATGCACTGGC TCTGGCTAAA CGCAAAGCCG AGGTTGCATT TGAATTCTTC CATAAACTGA ATGTACCGTA TTACTGCTTC CATGATGTGG ATGTCTCGCC AGAAGGCGCG TCACTACAGG AATATCTGAA TAACTTCGCC GTAATGACCG ATGTACTGGC TGAAAAACAA GCAGCCAGTG GTGTGAAATT ATTATGGGGC ACGGCTAACT GCTTTACCCA TCCTCGTTAT GGTGCTGGTG CCGCGACCAA TCCTGATCCA GAAGTATTTA GCTGGGCAGC CACCCAGGTC TTTACGGCCA TGAATGCCAC CCGCCAACTC GGCGGTGAAA ACTATGTGTT ATGGGGCGGA CGTGAAGGCT ACGAAACACT GTTGAATACC GATTTGCGAC AAGAGCGTGA ACAAATTGGC CGCTTTATGC AAATGGTCGT CGAACATAAA CACAAAACGG GTTTCCAGGG GACACTCCTT ATTGAGCCAA AACCGCAGGA GCCCACTAAA CATCAATACG ATTATGACGT CGCGACAGTT TACGGCTTCC TTAAGCAGTT CGGCTTAGAA AAAGAGATTA AAGTCAATAT TGAAGCCAAC CATGCCACGC TGGCGGGGCA CTCTTTCCAT CACGAAATTG CCAGTGCCAT CGCCTTAGGT ATTTTTGGCT CAGTGGATGC TAACCGGGGC GATCCGCAAC TGGGCTGGGA TACCGATCAA TTCCCAAACA GTGTAGAAGA AAATACACTG GTGATGTTCG AGATCCTCAA AGCAGGCGGT TTTACCACCG GGGGCCTGAA TTTTGATGCC AAAGTGCGCC GCCAAAGTAC CGATAAATAT GATCTGTTCT ACGGTCATAT TGGCGCAATG GACACCATGG CACTGGCGCT AAAATTTGCC GCCAAAATGA TTGAAGATGG GCAATTAGAT CAGATCGTTG CCAAACGTTA TGCCGGTTGG AATAGCGAGC TGGGCCAACA GATCCTGCAA GGTAAAATGT CGCTGGAAGA GCTCTCCCGC TATGCCAGTC AACATAATCT GAACCCGCAG CACCAAAGCG GTCATCAAGA GTTGTTGGAG AATAAGGTTA ACCGCTATTT ATTTGGTTGA
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Protein sequence | MQSYFNELEQ VRYEGSQSTN PLAFHHYNPD EMILGKRMAD HLRFAACYWH TFCWGGADMF GANAFDRPWQ QPGDALALAK RKAEVAFEFF HKLNVPYYCF HDVDVSPEGA SLQEYLNNFA VMTDVLAEKQ AASGVKLLWG TANCFTHPRY GAGAATNPDP EVFSWAATQV FTAMNATRQL GGENYVLWGG REGYETLLNT DLRQEREQIG RFMQMVVEHK HKTGFQGTLL IEPKPQEPTK HQYDYDVATV YGFLKQFGLE KEIKVNIEAN HATLAGHSFH HEIASAIALG IFGSVDANRG DPQLGWDTDQ FPNSVEENTL VMFEILKAGG FTTGGLNFDA KVRRQSTDKY DLFYGHIGAM DTMALALKFA AKMIEDGQLD QIVAKRYAGW NSELGQQILQ GKMSLEELSR YASQHNLNPQ HQSGHQELLE NKVNRYLFG
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