| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0056 |
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| Symbol | |
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| ID | 6090616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 62348 |
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| End bp | 63667 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641595115 |
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| Product | xylose isomerase |
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| Protein accession | YP_001718823 |
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| Protein GI | 170022318 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2115] Xylose isomerase |
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| TIGRFAM ID | [TIGR02630] xylose isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATCTT ATTTTAATGA ATTAGAACAA GTGCGCTACG AAGGTAGCCA GAGCACGAAT
CCTCTGGCGT TTCATCATTA CAACCCGGAT GAAATGATCC TTGGTAAGCG AATGGCTGAC
CATCTGCGGT TTGCCGCCTG TTACTGGCAT ACCTTCTGCT GGGGGGGGGC CGATATGTTC
GGTGCCAATG CTTTTGATCG CCCATGGCAA CAACCTGGGG ATGCACTGGC TCTGGCTAAA
CGCAAAGCCG AGGTTGCATT TGAATTCTTC CATAAACTGA ATGTACCGTA TTACTGCTTC
CATGATGTGG ATGTCTCGCC AGAAGGCGCG TCACTACAGG AATATCTGAA TAACTTCGCC
GTAATGACCG ATGTACTGGC TGAAAAACAA GCAGCCAGTG GTGTGAAATT ATTATGGGGC
ACGGCTAACT GCTTTACCCA TCCTCGTTAT GGTGCTGGTG CCGCGACCAA TCCTGATCCA
GAAGTATTTA GCTGGGCAGC CACCCAGGTC TTTACGGCCA TGAATGCCAC CCGCCAACTC
GGCGGTGAAA ACTATGTGTT ATGGGGCGGA CGTGAAGGCT ACGAAACACT GTTGAATACC
GATTTGCGAC AAGAGCGTGA ACAAATTGGC CGCTTTATGC AAATGGTCGT CGAACATAAA
CACAAAACGG GTTTCCAGGG GACACTCCTT ATTGAGCCAA AACCGCAGGA GCCCACTAAA
CATCAATACG ATTATGACGT CGCGACAGTT TACGGCTTCC TTAAGCAGTT CGGCTTAGAA
AAAGAGATTA AAGTCAATAT TGAAGCCAAC CATGCCACGC TGGCGGGGCA CTCTTTCCAT
CACGAAATTG CCAGTGCCAT CGCCTTAGGT ATTTTTGGCT CAGTGGATGC TAACCGGGGC
GATCCGCAAC TGGGCTGGGA TACCGATCAA TTCCCAAACA GTGTAGAAGA AAATACACTG
GTGATGTTCG AGATCCTCAA AGCAGGCGGT TTTACCACCG GGGGCCTGAA TTTTGATGCC
AAAGTGCGCC GCCAAAGTAC CGATAAATAT GATCTGTTCT ACGGTCATAT TGGCGCAATG
GACACCATGG CACTGGCGCT AAAATTTGCC GCCAAAATGA TTGAAGATGG GCAATTAGAT
CAGATCGTTG CCAAACGTTA TGCCGGTTGG AATAGCGAGC TGGGCCAACA GATCCTGCAA
GGTAAAATGT CGCTGGAAGA GCTCTCCCGC TATGCCAGTC AACATAATCT GAACCCGCAG
CACCAAAGCG GTCATCAAGA GTTGTTGGAG AATAAGGTTA ACCGCTATTT ATTTGGTTGA
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| Protein sequence | MQSYFNELEQ VRYEGSQSTN PLAFHHYNPD EMILGKRMAD HLRFAACYWH TFCWGGADMF
GANAFDRPWQ QPGDALALAK RKAEVAFEFF HKLNVPYYCF HDVDVSPEGA SLQEYLNNFA
VMTDVLAEKQ AASGVKLLWG TANCFTHPRY GAGAATNPDP EVFSWAATQV FTAMNATRQL
GGENYVLWGG REGYETLLNT DLRQEREQIG RFMQMVVEHK HKTGFQGTLL IEPKPQEPTK
HQYDYDVATV YGFLKQFGLE KEIKVNIEAN HATLAGHSFH HEIASAIALG IFGSVDANRG
DPQLGWDTDQ FPNSVEENTL VMFEILKAGG FTTGGLNFDA KVRRQSTDKY DLFYGHIGAM
DTMALALKFA AKMIEDGQLD QIVAKRYAGW NSELGQQILQ GKMSLEELSR YASQHNLNPQ
HQSGHQELLE NKVNRYLFG
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