Gene YPK_0028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0028 
SymbolmtlR 
ID6087221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand+ 
Start bp32986 
End bp33540 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content48% 
IMG OID641595087 
Productmannitol repressor protein 
Protein accessionYP_001718795 
Protein GI170022290 
COG category[K] Transcription 
COG ID[COG3722] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGAAA AAAAACAAGC ATTTGAGAAT CGGGTTCTTG AACATTTGAA CGCTGGGAAG 
ACCGTGCGCA GCTTCTTGAT GGCGGCAGTC GATTTATTGG CTGAAGCACT GAATATACTC 
GTGGTGCAGA TTTTTCGTAA AGATGACTAT GCGGTGAAGT ATGCCGTGGA GCCGTTACTG 
GTTGGTGACG GGCCATTGAG TGAACTCTCT GTGCGGTTGA AGCTGGTTTA TGCCCTTGGG 
GTGATCACCC GGCATGAATA TGAAGATGCT GAGCTATTAA TGGCGCTACG TGAAGAGCTA 
AACCACGATG GCACTGAGTA TCGCTTTACC GATGACGAAA TCCTCGGGCC ATTTGGTGAA 
TTGCATTGTG TCGATGAATT GCCGCCAGTA CCCACTTTTT TACGCCCTGA TGAAGCCGAT 
GCTTCGCTGA TTGCTATGCA ACGCCAGCGT TATCAGCAAA TGGTCCGCTC CACCATGGTG 
TTGTCGATCA CTGAACTGCT CTCTCGCATC AGCGTCAAAC AGGTCTCTAA GCTCTCGCCA 
TTAAGTCAAG GTTAA
 
Protein sequence
MIEKKQAFEN RVLEHLNAGK TVRSFLMAAV DLLAEALNIL VVQIFRKDDY AVKYAVEPLL 
VGDGPLSELS VRLKLVYALG VITRHEYEDA ELLMALREEL NHDGTEYRFT DDEILGPFGE 
LHCVDELPPV PTFLRPDEAD ASLIAMQRQR YQQMVRSTMV LSITELLSRI SVKQVSKLSP 
LSQG