Gene YPK_0018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0018 
Symbol 
ID6090459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand+ 
Start bp21718 
End bp22362 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content54% 
IMG OID641595077 
Productputative transcriptional regulator 
Protein accessionYP_001718785 
Protein GI170022280 
COG category[K] Transcription 
COG ID[COG2345] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATTG ATCATGGGGC CCGCCAGCCA CAATCAGTCG GTGAACGGCT ACTGCTGCTG 
CTCAAAACTC ACGGCCCGCT ACAAGCAGGT GAGGCGGGGA ACATTTTGGG CACCACCGGT 
GAAGCGGCGC GTCAGCAGTT TGTTAAACTG GCCAAAAAAG GGCTAGTGGT GGCCGAAGCA 
CAAACCCGCG GTGTGGGGCG GCCAATTCAG TTATGGCAAT TAACCGAGAG CGGTAATACA 
CATTTTCCTG ATGCCCATGG GGAGTTAGCT GTGCAACTTT TGCGCTTAAT TCGTACACAA 
TTGGGCGATA ACGCACTGGA ATTACTGATC GATAGCCGTG AACAGGAAAC TCGCGATCAA 
TATTGTCAGG CGATGGTCGG GGTCAGTAAT GTGGCTGAAC GCGTCGAGCG GTTGGTGGCT 
ATCCGCACCG GTGAAGGATA TATGGCACAA TCGCAGGTCG AGGCCGATGG CACTATTTTG 
TTGATCGAGA ATCATTGCCC TATCTGGGCG GCGGCGGCCA GTTGCCAGCG TTTTTGCCGT 
ACCGAACTGG CGGTATTCCA GCAAGCATTG GGCGTGCCGG TTGAGCGGGT TGAACATATT 
TTATCTGGTG CTCATCGGTG TACTTACCGC ATTCACCCCG AATAA
 
Protein sequence
MNIDHGARQP QSVGERLLLL LKTHGPLQAG EAGNILGTTG EAARQQFVKL AKKGLVVAEA 
QTRGVGRPIQ LWQLTESGNT HFPDAHGELA VQLLRLIRTQ LGDNALELLI DSREQETRDQ 
YCQAMVGVSN VAERVERLVA IRTGEGYMAQ SQVEADGTIL LIENHCPIWA AAASCQRFCR 
TELAVFQQAL GVPVERVEHI LSGAHRCTYR IHPE