Gene YPK_0010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0010 
Symbol 
ID6090528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp11264 
End bp11602 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content50% 
IMG OID641595069 
Producthypothetical protein 
Protein accessionYP_001718777 
Protein GI170022272 
COG category[R] General function prediction only 
COG ID[COG5645] Predicted periplasmic lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAATA TCGTTATCCC TTTTGCTACT GGCTGTTCGC TGCTGCTGAC CAGCGGTTGT 
TCCAGTATTT TGACTCACAC CAGCAGTAGC CAAGGCTATT ACTCTGGCAC CGAAGCCAAT
ATCGCCATGC TCAAAGATGA CGATACCGGC TGGGCACTAC GCCCCTTACT GGCAGTAGAC
CTGCCTTTCT CCGCCGTGAT GGATACCCTA TTCCTGCCCT ACGATTATTT GCGTTCAGAC
AATGAAGACA AAGTGACCAG TTCACCACGT GAACGTGTCC GGCAATCCGA GATGCAAAAC
CAGCAAACTA ATCAGACAGG TGATACGCCA AAACAATAG
 
Protein sequence
MRNIVIPFAT GCSLLLTSGC SSILTHTSSS QGYYSGTEAN IAMLKDDDTG WALRPLLAVD 
LPFSAVMDTL FLPYDYLRSD NEDKVTSSPR ERVRQSEMQN QQTNQTGDTP KQ