Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0001 |
Symbol | dnaA |
ID | 6087985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 37 |
End bp | 1389 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641595060 |
Product | chromosomal replication initiation protein |
Protein accession | YP_001718768 |
Protein GI | 170022263 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0593] ATPase involved in DNA replication initiation |
TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000634969 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGCAGGATG AGTTACCTGC CACAGAATTT AGTATGTGGA TACGCCCCCT ACAGGCGGAA CTGAGTGACA ATACTCTGGC GCTTTACGCA CCTAATCGTT TTGTACTGGA CTGGGTCCGT GATAAGTACT TAAACAATAT CAATGGCTTA CTTAATGATT TTTGTGGCAC CGAGGTCCCT TTACTGCGTT TTGAGGTAGG GAGTAAACCT GCGGCAAGAG CACACAATAA TCCAGTTACA GCCAGCGTGA GTGCGCCTGT TGCTCCGGTT ACCCGCAGTG CACCTATGCG CCCGAGCTGG GACAACTCAC CTGCTCAGCC TGAACTTTCT TATCGTTCGA ATGTGAATCC AAAACACACA TTTGATAACT TTGTTGAAGG TAAATCTAAC CAGTTGGCCC GCGCTGCCGC CCGTCAGGTA GCCGATAACC CAGGTGGTGC CTATAACCCG TTATTTCTTT ATGGCGGAAC AGGCTTGGGT AAAACCCATC TGCTACACGC GGTGGGGAAT GGCATTATGG CCCGTAAAGC CAATGCTAAA GTGGTCTATA TGCATTCCGA GCGTTTTGTG CAAGATATGG TCAAAGCCTT GCAAAATAAT GCTATCGAAG AGTTTAAACG CTATTATCGT TCGGTTGATG CTTTATTAAT CGATGATATT CAATTTTTTG CCAATAAAGA GCGTTCTCAA GAAGAGTTTT TCCACACCTT TAATGCGTTG CTAGAGGGTA ATCAGCAGAT CATTTTGACC TCAGATCGCT ATCCAAAAGA GATTAACGGG GTGGAAGATC GTCTGAAGTC GCGTTTTGGT TGGGGGCTGA CGGTCGCCAT TGAGCCACCA GAGCTGGAAA CGCGTGTAGC GATCCTAATG AAGAAAGCGG ATGAAAATGA TATTCGCTTA CCAGGAGAGG TCGCGTTCTT TATTGCCAAG CGTCTGCGTT CCAATGTGCG TGAATTGGAA GGGGCATTGA ACCGTGTGAT CGCCAATGCC AATTTTACTG GCCGCGCTAT CACGATTGAT TTTGTTCGCG AAGCCCTGCG TGATTTGTTG GCGTTGCAAG AAAAGCTGGT CACTATCGAT AATATTCAAA AGACTGTTGC TGAATATTAT AAAATTAAGG TCGCTGACCT GCTCTCCAAA CGGCGTTCCC GTTCGGTTGC CCGCCCTCGC CAAATGGCGA TGGCATTGGC AAAAGAGCTA ACCAACCACA GCCTGCCTGA AATCGGCGAT GCGTTTGGTG GCCGCGACCA TACCACGGTG TTGCACGCTT GCCGGAAGAT TGAGCAATTG CGTGAGGAAA GTCACGACAT CAAAGAAGAT TTCTCTAACT TAATCAGAAC ATTATCCTCC TAG
|
Protein sequence | MQDELPATEF SMWIRPLQAE LSDNTLALYA PNRFVLDWVR DKYLNNINGL LNDFCGTEVP LLRFEVGSKP AARAHNNPVT ASVSAPVAPV TRSAPMRPSW DNSPAQPELS YRSNVNPKHT FDNFVEGKSN QLARAAARQV ADNPGGAYNP LFLYGGTGLG KTHLLHAVGN GIMARKANAK VVYMHSERFV QDMVKALQNN AIEEFKRYYR SVDALLIDDI QFFANKERSQ EEFFHTFNAL LEGNQQIILT SDRYPKEING VEDRLKSRFG WGLTVAIEPP ELETRVAILM KKADENDIRL PGEVAFFIAK RLRSNVRELE GALNRVIANA NFTGRAITID FVREALRDLL ALQEKLVTID NIQKTVAEYY KIKVADLLSK RRSRSVARPR QMAMALAKEL TNHSLPEIGD AFGGRDHTTV LHACRKIEQL REESHDIKED FSNLIRTLSS
|
| |