Gene Daud_2198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_2198 
Symbol 
ID6026014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand- 
Start bp2310946 
End bp2311575 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content59% 
IMG OID641595016 
ProductTPR repeat-containing protein 
Protein accessionYP_001718317 
Protein GI169832335 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3063] Tfp pilus assembly protein PilF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCGGG AACCGCAGGG TTCCGAGGAG TTCATCGCGG AGCAGAAGCG GATTCTGAAG 
GAAAACGAGG ACTGCGCCAC CGCCGCCTAC AACCTGGGGG TGGCGATGAT GCAACAGAAC 
AGGCTTGATG AGGCCCGGGA ACACTTCGAG AAAGCGATCG AGACGGGCAG CCGGATGTTC 
GAGGCCTACG TTAACCTCGG CTACATCTAC TTTAAAGAGG GTGACATGGA AAAGGTCGCC 
GAAGTCAACC GGAAGGCCGT GGAACTGGAG CCCCGCTACG CCCGCGGTTA CGCGAACCTG 
GGCTTTGCTT ACCTGCAAAT GGCCAAGACC GGCGAGGCGA TCGAGGCGCT TCAAAAAGCC 
CTGGAACTCA ACCCGGAGAT CGCCCAAGCC TGGAACAACC TGGCCAACGC CTACCTGCAA 
CGGGGTGACG TGGACAAGGC GATCGAGGTC GGTGAAAGAC TGATTGCCCT CGCTCCGAAT 
TTTGGCCTGG GACACAACAA CTTAGCCGTG GCGTATTACC ATAAGGGCGA TTTTCCCAAG 
GCGGTCAAGC ACGCCGATAT TGCCGCGAGT TTGGGCTTCG CGCTGCACCC CGAGTTCGCG 
CAAATACTTG AACCCTATCG CCGAAAGTAA
 
Protein sequence
MPREPQGSEE FIAEQKRILK ENEDCATAAY NLGVAMMQQN RLDEAREHFE KAIETGSRMF 
EAYVNLGYIY FKEGDMEKVA EVNRKAVELE PRYARGYANL GFAYLQMAKT GEAIEALQKA 
LELNPEIAQA WNNLANAYLQ RGDVDKAIEV GERLIALAPN FGLGHNNLAV AYYHKGDFPK 
AVKHADIAAS LGFALHPEFA QILEPYRRK