Gene Daud_2187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_2187 
Symbol 
ID6027184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand- 
Start bp2301166 
End bp2301846 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content68% 
IMG OID641595005 
Productdeoxyribonuclease V 
Protein accessionYP_001718306 
Protein GI169832324 
COG category[L] Replication, recombination and repair 
COG ID[COG1515] Deoxyinosine 3'endonuclease (endonuclease V) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATGC ACTCCCTGCA CCCCTGGACC ATAGAGCCGG CCGGGGCGCG GGAACTCCAG 
CGGGAGCTGG CCGGACGACT CCGGTTCCAG TTCCCGCCGG GGTTGCGGGT CAGGCACGTG 
TGCGGCGTCG ATGTGTCTTC CGCCCGCACG GATAACCGGC TTTACGCGGC CGCCGTGGTG 
TTCTCCTTTC CGGAACTCGA ACTGGTGGAA GCGGCCACCG CCGTTCTGCC GGCTGCCTTT 
CCGTACGTGC CGGGTCTGCT GTCCTTCCGG GAAGGCCCGG TCCTGCTGGA GGCCCTGCAA 
CACTTGCGTG TCACTCCCGA CGTGGTGCTG TGCGACGGGC AGGGCACGGC CCATCCTCGG 
GGTGTGGGGA TCGCGAGTCA TCTCGGACTC TTCCTGGACC GGCCCACCCT GGGGGTGGCG 
AAGACAGTCC TGGTGGGCGA TTACAATCCC CCGGGGCCCG AGCCTGGGGC CGTCTCGCCC 
CTGGTCCACC AGGGCCGCGT CGTCGGTACC GTCCTCAGAA CCAAGCGCGG AGTGAAACCG 
GTGTTCATCT CCCCCGGGCA CCTTGTCGAT CCGGATACCG CCGTCGAACT GGCGCTGGCC 
TGCTGCCAGG GTTACCGCCT ACCGGAACCG GTGCGCCAGG CGCACCTTCT GTCTAACCGG 
CTGCGCCGGG TCAAAGCTTA G
 
Protein sequence
MKMHSLHPWT IEPAGARELQ RELAGRLRFQ FPPGLRVRHV CGVDVSSART DNRLYAAAVV 
FSFPELELVE AATAVLPAAF PYVPGLLSFR EGPVLLEALQ HLRVTPDVVL CDGQGTAHPR 
GVGIASHLGL FLDRPTLGVA KTVLVGDYNP PGPEPGAVSP LVHQGRVVGT VLRTKRGVKP 
VFISPGHLVD PDTAVELALA CCQGYRLPEP VRQAHLLSNR LRRVKA