Gene Daud_2185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_2185 
Symbol 
ID6026927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp2298824 
End bp2300197 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content67% 
IMG OID641595003 
Productputative spore germination protein 
Protein accessionYP_001718304 
Protein GI169832322 
COG category 
COG ID 
TIGRFAM ID[TIGR02889] germination protein YpeB 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCGTC CCGTGCTGGT TGCGCTCGTG TCTCTGGCGG TCCTGGCGGT GGTCTCCGCC 
TGGGCCTTTG AACAGTGGAG TGCGCGACGC CATCTCGAAA ACCTGCTCAA CGCCGAGTAC
CAGCGGTCCT TTTTTGACAC GGTGCTAAAC GTGCGTGGTC TGGAGGTGCT CCTCGGCAAG
GTCCTGGTCG GCGACGGCAG TCCCCAGGAC GCCGATCTGC TGGGGGAGAC CTGGCGGGAG
GCCGTCCTGG CCCAACGGGA ATTGAGCCAG CTCCCCGTCC AGCCGGCGGT CATCGGCCGG
ACCAGCCAGT TTCTAAACCA GGTAGGCGAG TTCACGAACG TCCTGATGCG GCAGGTGGCT
GCCGGCCGGC CCCCGTCGCC GGACCAGTGG AACACGCTCG AGGAGTTGCA CCGCCAGGCC
GGCATCCTGA ACACCCAACT CCAGGTGGTG CAGCGCCGCG TGGAGGCGGG CGGTGCTCGG
TACTGGGAAC TGGCTTCGGA GTTGCGTGCG CGCCGGGGCG CCCTCCGGCC GGCCCCGCCG
GACCCAGCGA GCACCGCATT GGAGGCGGTA AACCGGGAGA TGGAACAGTT TCCGACACTG
GTCTATGACG GCGCCTTTTC GGAACATATG GACCGCCGCG TGCCGCGTGC CGCTACCGGT
GCGCCCACTA CGGAGGAAAA AGCCCGGGAA AGGGCGCTGG CCGTGGTTGA CCGGCCCCGA
GGGGAATTGG TGGCGCGGGT AACCGGGACG ACCAAGGGCC GAATACCGTC TTACCGGGTG
GAGGTTGCGG AACGTAACGA CCCCGATGGT GACCGGTTGT TTCTGGTGGA CGTGGCCCGG
CGGGGCGGGG AAGTGGTCTG GATGTTGGAC ACCAGAACCC CCGGCGCGCC CGCGGTGTCC
GTCAGCGAGG CGCGGCGTGC GGCCGAGGAG TACTTGAACC GATTGGGCCG GCCGGACATG
GAGGCGGTGT CCTCGGAGCA GCAGGGCGAG GGCACGGTAA TGTTTGCCTT TGTGCCGCGG
CAAGACGGCG TCCTGCTGTA CACGGACATG ATCAAAGTGA CGGTGGCCCT GGACCAGGGG
CGTGTCAGCG GTTTGAACGC TCTGGACTAC GTGATGTACC ACCGGCCGCG GGAATTGCCG
GCTCCCGCGC TCAGTGCCGC CGAAGCCGCC CGCCGGGGTC TCAACCCGGA CTTTGTAGTC
CGGTCGTCCC GCCTGGTGCT CATTCCCACA ACCGGTGGTG GGGAGGCCCT GGCCTGGGAA
ATCAGGGGCG AAAGGGTCGG CAACGAATAC CTGGTGTACG TCAACGCCGG GAACGGGCGG
CGGGAGAAGA TTCTCCAGGT GGTGGAGACG GCGGAGGGGA CGCTGACCAT CTGA
 
Protein sequence
MKRPVLVALV SLAVLAVVSA WAFEQWSARR HLENLLNAEY QRSFFDTVLN VRGLEVLLGK 
VLVGDGSPQD ADLLGETWRE AVLAQRELSQ LPVQPAVIGR TSQFLNQVGE FTNVLMRQVA
AGRPPSPDQW NTLEELHRQA GILNTQLQVV QRRVEAGGAR YWELASELRA RRGALRPAPP
DPASTALEAV NREMEQFPTL VYDGAFSEHM DRRVPRAATG APTTEEKARE RALAVVDRPR
GELVARVTGT TKGRIPSYRV EVAERNDPDG DRLFLVDVAR RGGEVVWMLD TRTPGAPAVS
VSEARRAAEE YLNRLGRPDM EAVSSEQQGE GTVMFAFVPR QDGVLLYTDM IKVTVALDQG
RVSGLNALDY VMYHRPRELP APALSAAEAA RRGLNPDFVV RSSRLVLIPT TGGGEALAWE
IRGERVGNEY LVYVNAGNGR REKILQVVET AEGTLTI