Gene Daud_2179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_2179 
Symbol 
ID6025627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp2290548 
End bp2291447 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content66% 
IMG OID641594997 
Productsignal peptide peptidase SppA, 36K type 
Protein accessionYP_001718298 
Protein GI169832316 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0616] Periplasmic serine proteases (ClpP class) 
TIGRFAM ID[TIGR00706] signal peptide peptidase SppA, 36K type 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGGCAGA AAATACTGGC GGGGGTGATC CTGGGCGTGG TTGTCCTGTC GCTGATTCTG 
GTGGCCGTGC TTGGGAGCCG GACCGGACCT GAAGGCCGGC GGGCGACCGG AGAGCAAATC
GGCCTGATCC GGATTGAGGG TATGATTATT GGAGGTACCG AGGGGAGTTT CTTCGGGCTC
GGAGGCGCCG AGGAAATCAC GGCCCAGATT CAGGAGGCGG CCGACAACCC GAACATCAGG
GCGGTGGTGC TGCGTCTGAA CAGCCCCGGC GGCTCGGCGG CCGCCTCCCA GGAGATCAGT
GAAGCCGTGG TCCGGCTGCG CGAGGCCGGA AAACCGGTCG TGGTCTCCAT GGGGGATACG
TCTGCCTCAG GCGCGTACTG GATCGCGTGT CACGCCGACG CCATCGTGGC CAACCCGGCC
ACCATCACGG GCAGTATCGG GGTGATTATC CAGACCACGC ACCTCACCGA CTTGTACGAC
ATGCTCGGGA TCGAGACCGA AACCTTCAAG AGCGGCCCCC ACAAGGATAT GGGTAGCCCG
GACCGGGTGC CGACCCCCGA AGAACGGGCC ATCTTCCAGG GAATGGTGGA CGACATCTAC
GCCCAGTTCG TCGCGGTGGT GGCCCGGGGC CGGAACATGC CCGAGGACCA GGTGCGTAAA
TTGGCCGACG GGCGGATCTT CACCGGCCGC CAGGCTTATG AACTCGGGCT GGTGGACCAG
CTTGGAGATC TCCAGGACGC CGTGCGGGCG GCCGCCGAAC TGGGCGGCCT GGACCCGGAC
GCCCCGGTGG TGGAACTGGG CCGGCGGCCC TTCTTCCGCG ATTTCTGGGG TGGGCTCTCG
TCCCTGTTAA GGCCGCAAAC GTCCTGGCTC CTGACCGCCC CGCCGGTGGA ACAGCGCTAG
 
Protein sequence
MRQKILAGVI LGVVVLSLIL VAVLGSRTGP EGRRATGEQI GLIRIEGMII GGTEGSFFGL 
GGAEEITAQI QEAADNPNIR AVVLRLNSPG GSAAASQEIS EAVVRLREAG KPVVVSMGDT
SASGAYWIAC HADAIVANPA TITGSIGVII QTTHLTDLYD MLGIETETFK SGPHKDMGSP
DRVPTPEERA IFQGMVDDIY AQFVAVVARG RNMPEDQVRK LADGRIFTGR QAYELGLVDQ
LGDLQDAVRA AAELGGLDPD APVVELGRRP FFRDFWGGLS SLLRPQTSWL LTAPPVEQR