| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_2172 |
|---|
| Symbol | |
|---|
| ID | 6025408 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | - |
|---|
| Start bp | 2284287 |
|---|
| End bp | 2285141 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641594990 |
|---|
| Product | peptidase M23B |
|---|
| Protein accession | YP_001718291 |
|---|
| Protein GI | 169832309 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTTGA AGCGTTTGCT AGTGACCGGC CTGGCTAGTG TATTGCTGGC GGGTTCTTAC
CTGTACCCGG CCGGCGCCCG GTTGGACGAA TGGATTCCGG CCGACCGGCC CTACGAGTAT
CCGGCGGCCC GGACCTTATC GAGCCGGTAC GTGGTGAAAG AGGGCGACAG CCTGTGGAAG
ATCGCCGTGG AGCACCGGGT GGATGTGGAT ACGCTGCTGG AATTGAACAG CATCCGCAAC
CCGGATTACA TCCGGCCCGG CCAGTTGTTG ACCGTTCCGG GCATCCGCCT GCAGCACTTG
GTGCAGGAGG GTGAAAACCT GACCGTTATT GCCGTGATGT ATCGGGTGAC GGTGGCCGAC
CTGGTGCGGG AGAACGGGCT TGACAACCCG GACCGGCTGT TTCCCGGCCA GCGGCTCTCT
GTCCCCGTGC ACGCGCACGG CGGTCCGGCG GTTCCGGCGG CCGGGTGGAA GAGCCTTTTA
ATGCCGACTG CGGGACACCT GACATCTGGT TTCGGAGTGC GTGAGGACGG GCAACCCCAC
TACGGCATCG ACATCGCCGC CGACCACGGC GCGCCGGTCC GGGCGGCCGA GGCCGGTCGG
GTCGTATTCG CCGGTCCGGC GGGCACCTTT GGCCTGCTGG TCATCCTGGA CCACGGCGAC
GGGCTCACCA CCTACTACGC CCACTGCTCG GAGATCACCG TGTCCTATCA GGACCGGGTC
AACGCCGGGG AGATTATCGC CCGGGTGGGC TCGACCGGCC GTTCCTTCGG CCCGCACCTG
CACTTTGAGG TGCGCTGGAA CGGCGAGCCT TACGACCCGA TGCTCTACCT GACCGGGGTG
GGCTACGAGA TCTAA
|
|---|
| Protein sequence | MFLKRLLVTG LASVLLAGSY LYPAGARLDE WIPADRPYEY PAARTLSSRY VVKEGDSLWK
IAVEHRVDVD TLLELNSIRN PDYIRPGQLL TVPGIRLQHL VQEGENLTVI AVMYRVTVAD
LVRENGLDNP DRLFPGQRLS VPVHAHGGPA VPAAGWKSLL MPTAGHLTSG FGVREDGQPH
YGIDIAADHG APVRAAEAGR VVFAGPAGTF GLLVILDHGD GLTTYYAHCS EITVSYQDRV
NAGEIIARVG STGRSFGPHL HFEVRWNGEP YDPMLYLTGV GYEI
|
|---|
| |