Gene Daud_2172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_2172 
Symbol 
ID6025408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp2284287 
End bp2285141 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content65% 
IMG OID641594990 
Productpeptidase M23B 
Protein accessionYP_001718291 
Protein GI169832309 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTTGA AGCGTTTGCT AGTGACCGGC CTGGCTAGTG TATTGCTGGC GGGTTCTTAC 
CTGTACCCGG CCGGCGCCCG GTTGGACGAA TGGATTCCGG CCGACCGGCC CTACGAGTAT
CCGGCGGCCC GGACCTTATC GAGCCGGTAC GTGGTGAAAG AGGGCGACAG CCTGTGGAAG
ATCGCCGTGG AGCACCGGGT GGATGTGGAT ACGCTGCTGG AATTGAACAG CATCCGCAAC
CCGGATTACA TCCGGCCCGG CCAGTTGTTG ACCGTTCCGG GCATCCGCCT GCAGCACTTG
GTGCAGGAGG GTGAAAACCT GACCGTTATT GCCGTGATGT ATCGGGTGAC GGTGGCCGAC
CTGGTGCGGG AGAACGGGCT TGACAACCCG GACCGGCTGT TTCCCGGCCA GCGGCTCTCT
GTCCCCGTGC ACGCGCACGG CGGTCCGGCG GTTCCGGCGG CCGGGTGGAA GAGCCTTTTA
ATGCCGACTG CGGGACACCT GACATCTGGT TTCGGAGTGC GTGAGGACGG GCAACCCCAC
TACGGCATCG ACATCGCCGC CGACCACGGC GCGCCGGTCC GGGCGGCCGA GGCCGGTCGG
GTCGTATTCG CCGGTCCGGC GGGCACCTTT GGCCTGCTGG TCATCCTGGA CCACGGCGAC
GGGCTCACCA CCTACTACGC CCACTGCTCG GAGATCACCG TGTCCTATCA GGACCGGGTC
AACGCCGGGG AGATTATCGC CCGGGTGGGC TCGACCGGCC GTTCCTTCGG CCCGCACCTG
CACTTTGAGG TGCGCTGGAA CGGCGAGCCT TACGACCCGA TGCTCTACCT GACCGGGGTG
GGCTACGAGA TCTAA
 
Protein sequence
MFLKRLLVTG LASVLLAGSY LYPAGARLDE WIPADRPYEY PAARTLSSRY VVKEGDSLWK 
IAVEHRVDVD TLLELNSIRN PDYIRPGQLL TVPGIRLQHL VQEGENLTVI AVMYRVTVAD
LVRENGLDNP DRLFPGQRLS VPVHAHGGPA VPAAGWKSLL MPTAGHLTSG FGVREDGQPH
YGIDIAADHG APVRAAEAGR VVFAGPAGTF GLLVILDHGD GLTTYYAHCS EITVSYQDRV
NAGEIIARVG STGRSFGPHL HFEVRWNGEP YDPMLYLTGV GYEI