Gene Daud_2161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_2161 
Symbol 
ID6025654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp2276065 
End bp2277570 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content65% 
IMG OID641594979 
ProductNADH dehydrogenase (quinone) 
Protein accessionYP_001718280 
Protein GI169832298 
COG category[C] Energy production and conversion
[P] Inorganic ion transport and metabolism 
COG ID[COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit 
TIGRFAM ID[TIGR01770] proton-translocating NADH-quinone oxidoreductase, chain N 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCAC ACCTCCCGAT CCTCATCGTT ATCATCCCCC TGTTCGTGGC TATGGCGGCC 
CGCCTGCTGG TCCGGCTGTC GGTTCCGTTC ACCCGGGGCT TCGTCCTGGC GGCGGCGCTG
GCCGTGTTGG CCTCCGGGGC CGTCGCGCTG GCCGAAACGT TGGTCCGGGG GGAACCATGG
CGCTATTACG TGTCCGGCTG GCCTCCGCCC TGGGGCATTG AGCTTGTCAT CGATCCTCTG
GCAGGTGGCC TGATTGTCCT GGTGGCTTTC TTCGGCCTGG CCGCCCTGGT GTATGCCGGC
CCGTACCTGC AGGGCCGGAC GCCGCGGGAG CAGGGGAGCT TTTACGCCCT CTTCCTGCTC
GCCAAGGCCG GCCTGCTGGG CATGTGCGCC ACCGGCGACC TCTTCAACCT GTACGTGTTC
CTGGAGATCT CTTCCTTGGC GGCGTACGCC CTGATCGCCT TCGGGGGGCG CCGGTCGATC
GTGGCCGCTC TGCGGTACCT GATCATCGGC ACGGCCGCCG CCTGCTTCTA TCTCCTGGGG
GTCGGCTACC TATACGCAAT GACCGGTTCC CTGAACATGG CTGACCTGGC GGTACTGTTG
CCGCCGCTTA TGGATTCACC GGTGGTCATT CTGGCCCTGG TCTTCATTGT GGCTGGCCTG
GGGATCAAGA TGGCGCTTTT CCCGCTCCAC GGCTGGCTGC CGGACGCCTA CAGCTACACG
CCGGCCCCGG TGCTGGCCTT TATGGCCGCT GTGATGACCA AGGTGAGCGC CTACGCCCTG
TACCGGATCT TGTACTTCGT GACCGAGGCC GCCGGACCGG TTTCCCCGAC CCTGCAGGTG
CTCGGGTGGA TGGCGGCCGC CGGGATTCTC TTCGGTTCGA TCATGGCCAT CGCCCAGCGC
GATTTGTGGC GGATGCTGGC TTACTCCAGC GTGGCCCAGG TGGGGTACAT CGTCCTCGGG
CTGGCGGTGG GCAACGTTTT GGCGTTGTAC GGCGCGCTCC TACACGTCCT GAGCCACGCG
CTCGTGAAGG GCGGGCTCTT TTTCATTGCC GGGGGCGTCA GCTGGGAAAC CGGCGTACGG
CGGGTGTCCG ACTTTGTGGG CATAGCCAAA AAAATGCCGC TCACCATGGG GGCCTTTGTG
GCCGCCGCGC TGTCTATGAT CGGGCTGCCG CCCACGCTCG GGTTCTTCAG CAAGTGGTAC
CTGGTCCTGG GGTGTCTGGA GGCGGGAGCC TGGGTGTTTG TCGCGGTGCT CGTCGTGAGC
AGCCTCTTGA CCGCGGTCTA TTTCTTCCGC GTGATTGAGA ACGCCTACCT GAAAGGCTTA
CCGCAGCCGG GGGCGCGGGC CGAACGGCCG GTCCCGCCCG GCGCGCGCCG GTTCAGGCTG
GAGCTTCCGG CGAGCATGCT GGTGCCGATC CTGGTGCTCG GCATCGGCGT GGTGGTCCTG
GGCCTTTTCA ACGAGCAGAT CATCAGCAAC GTGATCCAAT ATGCGCTTCC GTGGAGGTTG
CCTTAG
 
Protein sequence
MTAHLPILIV IIPLFVAMAA RLLVRLSVPF TRGFVLAAAL AVLASGAVAL AETLVRGEPW 
RYYVSGWPPP WGIELVIDPL AGGLIVLVAF FGLAALVYAG PYLQGRTPRE QGSFYALFLL
AKAGLLGMCA TGDLFNLYVF LEISSLAAYA LIAFGGRRSI VAALRYLIIG TAAACFYLLG
VGYLYAMTGS LNMADLAVLL PPLMDSPVVI LALVFIVAGL GIKMALFPLH GWLPDAYSYT
PAPVLAFMAA VMTKVSAYAL YRILYFVTEA AGPVSPTLQV LGWMAAAGIL FGSIMAIAQR
DLWRMLAYSS VAQVGYIVLG LAVGNVLALY GALLHVLSHA LVKGGLFFIA GGVSWETGVR
RVSDFVGIAK KMPLTMGAFV AAALSMIGLP PTLGFFSKWY LVLGCLEAGA WVFVAVLVVS
SLLTAVYFFR VIENAYLKGL PQPGARAERP VPPGARRFRL ELPASMLVPI LVLGIGVVVL
GLFNEQIISN VIQYALPWRL P