Gene Daud_2157 details

Gene Information

• Locus tag: Daud_2157
• ID: 6025629
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Candidatus Desulforudis audaxviator MP104C
• Kingdom: Bacteria
• Replicon accession: NC_010424
• Strand: -
• Start bp: 2271645
• End bp: 2272193
• Gene Length: 549 bp
• Protein Length: 182 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 641594975
• Product: Rieske (2Fe-2S) domain-containing protein
• Protein accession: YP_001718276
• Protein GI: 169832294
• COG category: [P] Inorganic ion transport and metabolism; [R] General function prediction only
• COG ID: [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.00819561
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAGATCA GGAAAGACTT GGCGCTTTCA CGGTCGGAGG CGGCCCGGTT CTTGAAAGCC 
TTGGCTGCGG AGATCGAAGA GAAAGGCCGC CTCGACCTGA ATGGGCTTGA TGTTCCGCTG 
CCTGCCTTGT TCAAGGTGGA GCTGGAATAC AAGGACAAGC CCGATAAGAA AAAGCTGGAA 
ATTGAATTCA AGTGGCCTGT GGAATCCTTA TCTGTATCTG TTGTCCGGAA CAAAGACTCG 
GTGACGGAGA GGATCAGGAT CGTCTCCCAC GGGAGCCTGC CCGTCGGCAA AGCGGTCGGT 
TTTGTGTATC GGGGTCGGGA ATCCTTGCTG ATTCATCTCG CCCCGGGGGA ATACAAGGCC 
TACCATCGGC GCTGCCCGCA CAAGGGAGAG CCTCTTTCCT GGTACGAACC CACGCGCGAA 
ATACACTGCG AGGCTCACGG AGCCGTCTTT GACGCTGCCA CCGGGGCGGT CCTCAAGGGG 
CCGGTCCGGG AGGGCCTGCG GCCGATCCGC CTGGAAGTCA CTGACGAGGG AATTTTCGCG 
GCGGAATGA 

 

Protein sequence

MKIRKDLALS RSEAARFLKA LAAEIEEKGR LDLNGLDVPL PALFKVELEY KDKPDKKKLE 
IEFKWPVESL SVSVVRNKDS VTERIRIVSH GSLPVGKAVG FVYRGRESLL IHLAPGEYKA 
YHRRCPHKGE PLSWYEPTRE IHCEAHGAVF DAATGAVLKG PVREGLRPIR LEVTDEGIFA 
AE