Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_2130 |
Symbol | |
ID | 6025599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | - |
Start bp | 2250293 |
End bp | 2250745 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641594948 |
Product | PilT domain-containing protein |
Protein accession | YP_001718249 |
Protein GI | 169832267 |
COG category | [R] General function prediction only |
COG ID | [COG4113] Predicted nucleic acid-binding protein, contains PIN domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.463542 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAGCT GCATCTGCCT GGATACCTCC GTGCTGATCA AGATTCTCGT TGAAGAACCA GGCAGCGATC TGGCGGTGGC CTTGTTTCGA AGGGTTATTG CAAAACGGCG GGTCGTTGTC TTGCCTGCCT TTGCCTGGGC AGAGCTGGGG ACGGTTCTGC GCAAGAAATG CCGAACCGGT GAACTCGCTA TTGGGGAAGC GGACGAACTG TGGTCCATGT TCCGGGAGTT GCCGGAAATC GTGTACCTGG AGCACCGTGC GGTTCAGGAG CGGGCCTGGC TGATCAGCCG CCGGTTTGAT CTGCCCACCC TCTACGATGC GGCTTTCCTG GCCGTTGCCG AAGTGGTTGC CGAGAAAACG GGGGAAGTCT GCGAATATTG GACGGCGGAC GAAAAGCTGG TCAACCTGCT GGGCGGTCAA AGAGCGTACG TCAGGTGGTT GGGAGGCTTG TAA
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Protein sequence | MSSCICLDTS VLIKILVEEP GSDLAVALFR RVIAKRRVVV LPAFAWAELG TVLRKKCRTG ELAIGEADEL WSMFRELPEI VYLEHRAVQE RAWLISRRFD LPTLYDAAFL AVAEVVAEKT GEVCEYWTAD EKLVNLLGGQ RAYVRWLGGL
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