Gene Daud_2130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_2130 
Symbol 
ID6025599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp2250293 
End bp2250745 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content58% 
IMG OID641594948 
ProductPilT domain-containing protein 
Protein accessionYP_001718249 
Protein GI169832267 
COG category[R] General function prediction only 
COG ID[COG4113] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.463542 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAGCT GCATCTGCCT GGATACCTCC GTGCTGATCA AGATTCTCGT TGAAGAACCA 
GGCAGCGATC TGGCGGTGGC CTTGTTTCGA AGGGTTATTG CAAAACGGCG GGTCGTTGTC
TTGCCTGCCT TTGCCTGGGC AGAGCTGGGG ACGGTTCTGC GCAAGAAATG CCGAACCGGT
GAACTCGCTA TTGGGGAAGC GGACGAACTG TGGTCCATGT TCCGGGAGTT GCCGGAAATC
GTGTACCTGG AGCACCGTGC GGTTCAGGAG CGGGCCTGGC TGATCAGCCG CCGGTTTGAT
CTGCCCACCC TCTACGATGC GGCTTTCCTG GCCGTTGCCG AAGTGGTTGC CGAGAAAACG
GGGGAAGTCT GCGAATATTG GACGGCGGAC GAAAAGCTGG TCAACCTGCT GGGCGGTCAA
AGAGCGTACG TCAGGTGGTT GGGAGGCTTG TAA
 
Protein sequence
MSSCICLDTS VLIKILVEEP GSDLAVALFR RVIAKRRVVV LPAFAWAELG TVLRKKCRTG 
ELAIGEADEL WSMFRELPEI VYLEHRAVQE RAWLISRRFD LPTLYDAAFL AVAEVVAEKT
GEVCEYWTAD EKLVNLLGGQ RAYVRWLGGL