| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_2083 |
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| Symbol | |
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| ID | 6026256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | - |
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| Start bp | 2195821 |
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| End bp | 2197527 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641594903 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001718204 |
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| Protein GI | 169832222 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.17301 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCGGTGC GTGCCGGAAA CATTTTCAGC GTGCTATACC TCTGGACCGT GATCATCGGG
GGCGTTGTGC TGCTGGTCCG GCTTTTCCCC GCCGTCGACT TGGACTTCAG CGTGGAACTG
GCCGTGCTGA TTCTGGTCGC CATGGCGGCC GAGTGGCTGG TGGTTTCTTT CCCGCACGGA
CAGCTCTCCG CCGGCTACGT GATCACCTTC GGCGCCTTCC TCGTCTACGG GCCCGCGGGG
GCGGCCTGGG TGAACGCGCT CGGCACCCTG TTCGGTCAGG GAATCGCCAA CCGGGGTAAT
CCGGTCCGGA CCACCCTGTT CAACGCCGCC CAGAGCGTGC CGGCCGTGTA CGGCGCCTAT
CTGGCTTACC TGTTCTGCGG CGGGACGCCC CATCCGGGGG AGATGCTCAC CCTAGCCAAC
GTCCTGCCGC TGCTGGCTTT CTCCGCTGCT TACTTCGCGC TCAACAACTT GCTGGTCACC
CTGTACCTGC TGCCCAAGCG CGGGCTATCC TTCAACACTT GGCGCACTGC CCTGCGCTGG
GACGCCTCGA CCTACCTCTT CTTGATCCCG CTCGGTTTTC TGGTGGCCGC CCTGTACCGT
TCCGCCGGGT TCACCGGCGC TTTTCTGGTG CTCCTGCTTG GATTGATCGT CCAGTTCTTC
GTGCGCCGCT TTGTGATGGT GGAGGAGAAC AACCGGGAGC TGCGCCTGCT CTATACGGTG
GCGCAGGGGC TTGGCACCAG CCCTGACCTG GACGAACTGT TACGGCTGAT CCTGCGGGAA
GTCAGGCGGC TGGTGCCTTA CGACACGGCC GCGGTCTATC TCTGGTCCGA GGAGCGGCAC
CTTTTTGTGC CGGTGGTGCT GGAGGGTGCC GGTGCCGGCG AATTGCACGA CATCGTCTGG
GAACGAGACG AGGGGATTGT CGGTTGGGCG GCGCGCAACC GGGAGCCCCG CCTGGTCACC
GACCTCCGCC AAGAACCGGA ATTGCAGCGG CAGACCGGAC TATCCCGGTT CATGCGTTCA
CTGGTTTTGC TGCCCCTGGT GTTCGGAAAC GAGATGCTGG GGGTGTTCGT GATCGGGGAC
AAGCGCCCCG GTGTCTACGA CGAAAAGAGC CTGGGCCTTT TGAAGATTAT CGGGGGCCAG
ATGGCGGCGG CTGCCGACAA CCGGCGCTTA AACCGCCGGT TGAAAAAGGT GGCCGGGCGC
GACTACCTCA CCGGCCTGCC CAACCGGGAA CAGTTCTTCA ATCAACTGGA GGCCGAGTTG
GTGGAAAACG AGCGCCGGGA CCGGCCGCTG GCCGTCATTC TGCTCGACAT CGACGGACTG
TACGACTTGA ACCGTCGCTT CGGGTACGCC GTCGGGGACA CCGTCCTGGT TCAGGTCGCC
CGGGCGCTGG AGGAATGGCT GCCGGCGGGC GGCATGGCGG CCCGCTATGG GGGCGACGAG
TTCGCCCTGT TGCTGCCCGA TACCGGGGAG ATTCGCGCGG CCCAGAGGGC CGAGCGCCTG
CAGCGCCTGC TGGGGCGCAT CTCTGTCGGC GCGAAGGAGC TTAAGGAACG GGTCCGGCTC
TCGGTAAGCA CCGGTTTTGC CACCGCGCCG TTGGACGGGG CCACCGCCGA CGCGTTGCTG
GCCAGGGCCG AGGATCACCT TTACCGGTCT GCCGGGCGGG AGGTCCCCGA ATTCCGGCCC
GCGGGCGGAC ACACGACCAG TGTCTAG
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| Protein sequence | MPVRAGNIFS VLYLWTVIIG GVVLLVRLFP AVDLDFSVEL AVLILVAMAA EWLVVSFPHG
QLSAGYVITF GAFLVYGPAG AAWVNALGTL FGQGIANRGN PVRTTLFNAA QSVPAVYGAY
LAYLFCGGTP HPGEMLTLAN VLPLLAFSAA YFALNNLLVT LYLLPKRGLS FNTWRTALRW
DASTYLFLIP LGFLVAALYR SAGFTGAFLV LLLGLIVQFF VRRFVMVEEN NRELRLLYTV
AQGLGTSPDL DELLRLILRE VRRLVPYDTA AVYLWSEERH LFVPVVLEGA GAGELHDIVW
ERDEGIVGWA ARNREPRLVT DLRQEPELQR QTGLSRFMRS LVLLPLVFGN EMLGVFVIGD
KRPGVYDEKS LGLLKIIGGQ MAAAADNRRL NRRLKKVAGR DYLTGLPNRE QFFNQLEAEL
VENERRDRPL AVILLDIDGL YDLNRRFGYA VGDTVLVQVA RALEEWLPAG GMAARYGGDE
FALLLPDTGE IRAAQRAERL QRLLGRISVG AKELKERVRL SVSTGFATAP LDGATADALL
ARAEDHLYRS AGREVPEFRP AGGHTTSV
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