Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_2080 |
Symbol | |
ID | 6025990 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | - |
Start bp | 2191444 |
End bp | 2194155 |
Gene Length | 2712 bp |
Protein Length | 903 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641594900 |
Product | preprotein translocase subunit SecA |
Protein accession | YP_001718201 |
Protein GI | 169832219 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.240841 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCTCGGAT TCTTGAAGAA TTTCCTGGAT GATAACGCCC GCGAGGTGAA AAAGTTGCAG CGGGTGGTCA CGGCCGTAAA CGAACTGGAG CCCCGCATCG AGAAACTCAC GGATGCCGAA CTCCAGGCCA AAACTCCTGC TTTGCGGGAG CGCCTGGAGG CCGGTGCGCC GCTCGACGAC CTTTTGCCCG AGGCCTTTGC GGTGGTCCGG GAGGTTTCGC GCCGGGTCCT GGACATGCGG CACTTCGACG TGCAGATCAT GGGGGGCGTG GTGCTGCACC AGGGTAAGAT CGCCGAGATG AAGACCGGTG AAGGCAAGAC CCTGGTGGCC ACCCTGCCGG CGTACCTCAA TGCTCTGACG GGGCGGGGGG TGCACATCGT AACCGTAAAC GACTACTTGG CCAAGCGGGA CAGCGAGTGG ATGGGCCACA TCTACCGGTT CCTGGGCCTC TCCACCGGAC TGATCGTGCA CGGGCTCGAC GCACGGCAGC GCCAGGCGTC GTACGCGGCG GACGTGATCT ACGGCACCAA CAACGAGTTC GGTTTCGACT ACCTGCGGGA CAACATGGCC ATGTATCCCC GGGACTTGGT GCAGCGCGAT CTTTACTACG CCATCGTGGA CGAGGTGGAC AGCATTCTGA TCGACGAGGC GCGCACGCCG CTCATCATCT CGGGTCAGTC GGGCAAGCCG ACCGACACCT ACTACACCAT GGCCCGGCTG GTGCCGAAGC TGAAAGCCGA GACCCACTTC GCGGTGGACG AGAAGGCGCG CACGGTCAGC CTGACCGAGG AAGGCTTCGC TCGCTGCGAG GAATTGCTTA ACATCGACAA CCTGTCCGAC CCGGAACACG AAGAGGTCCT GCACCACCTG AACCAGGCGC TCAAGGCGCA CGCCCTGATG AAGAGGGACC GCGACTACGT GGTGAAGGAC GGTCAGGTGA TCATCGTGGA CGAGTTCACC GGCCGGCTGA TGTTCGGCCG CCGCTATTCC GACGGCCTGC ACCAGGCGAT CGAGGCCAAG GAGGGCGTGA AAATCGAGCG GGAGTCGCAG ACCCTGGCCA CGATTACCTT CCAGAACTAC TTCCGGATGT ACGAGAAGCT GGCCGGCATG ACCGGCACCG CGGACACCGA AGCCGAGGAA TTCAAGAAGA TATACGGGCT GGACGTGGTG GTCGTTCCGA CCCACAAGCC TATGATCCGG GAAGACCTAC CCGACGCCGT CTTCAAGACC GAGGAGGGTA AGTTCCGTGC GGTGGTCGAA GAGATCGCCG CCCGACACGC CACCGGGCAG CCGGTGCTGG TGGGCACCAT CTCGATTGAG AAGTCGGAAG TCTTGAGCCG GATGCTGACC AGGCGGGGGA TACCGCACCA GGTCCTGAAC GCGAAATATC ACGAGAAAGA GGCGGAGATC GTGGCCCAGG CCGGCCGGAT CGGGGCGGTG ACCATCGCCA CCAACATGGC CGGCCGCGGC ACGGACATCA TGCTGGGAGG CAACCCGTCG TTCCTGGCCC TGCAGGAGAT GCGCCGGCGG GACTACCCGC CGGAGGTGAT CGCCGAGGCG GCTGAGTACG GCCCCTGCAC GGAAGAGGTG GCCGAGGCCC GGCGGGTCTA CCGGGAACTG TACGCCGAGT TCAAAAAAGA GACCGATGCC GAGCACGACC GGGTGGTCGC GCTGGGCGGC CTTTTCATCA TCGGTACCGA ACGCCATGAA GCCCGCCGGA TTGACAACCA GCTGCGGGGC CGCTGCGGCC GCCAGGGCGA CCCGGGAGCG ACCCAGTTCT TTGTGGCGTT GAACGATGAC CTGTTGCGCC TGTTCGGGGG CGATAATATC GCCGGGCTGA TGGACCGGCT GAAGATGGAC GAGGATGCTC CCCTGGAGCA TCCGCTGATT TCAAAGTCCC TGGAAACGGC CCAGCGGCGG GTGGAGAACC GCAACTTCAG CATCCGCAAG CATGTGCTGA ACTACGACGA CGTGATCAAC CAGCAGCGGG AGCTGATTTA CCGGCAGCGC CGCCAGGTGC TGTGCGGGGA GGACCTGAGG CCGGTGGTGC GACAGATGAT GGAAGAAGTG GCCGGTCAGG CCGTGACCGC CTTCGCACCG GAAGGGGTCT ACCCGGAGGA ATGGAACTAC GAAGGCCTGT CCGAGTACAT GACCCAGATC CTGCCCGGAG AAAAATGGAC CGTGGAGGAC CTGGAAGAGC GTCTGGGCAA GAAACGCGAC GACTTCCGCC GGGAGGATTT GCGGCGGCTG TTCCTGAACG AGATGGAACA GGCTTACGCA GCCCGGGAGG CCGAACTAGG CGCGGAAACC ATGCGGGAGA TTGAGCGGGT CCTGATGCTG CGTATCGTGG ACGAGAAGTG GATGGACCAC CTGGACGCCA TGGACCAGCT CCGGGAGGGC GTGGGCTTGC GGGCGTACGG CCAAAAAGAC CCGCTGGTGG AATACAAGTT TGAGAGTTTT GACATGTTCC AGAACATGAT CGCGAGCATC CAGGAGGAGA CGGTCAAGAA ACTGTTCCGG GTCCGCGTGG TGCCGCCGCA GCAGGCGGAA CGGCGGCAGG TCAAAGAGAA CCTTTATGCC GCCGGCGGCG ATGGAGTAAA GCAGCCGGTG CGGCGTGACA AGAAGGTGGG CCGCAACAGC CCCTGCCCGT GCGGGAGCGG CAAGAAGTAC AAAAAGTGCT GCGCCGCCAA AGACGAGCAG GCGGCGGGAT GA
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Protein sequence | MLGFLKNFLD DNAREVKKLQ RVVTAVNELE PRIEKLTDAE LQAKTPALRE RLEAGAPLDD LLPEAFAVVR EVSRRVLDMR HFDVQIMGGV VLHQGKIAEM KTGEGKTLVA TLPAYLNALT GRGVHIVTVN DYLAKRDSEW MGHIYRFLGL STGLIVHGLD ARQRQASYAA DVIYGTNNEF GFDYLRDNMA MYPRDLVQRD LYYAIVDEVD SILIDEARTP LIISGQSGKP TDTYYTMARL VPKLKAETHF AVDEKARTVS LTEEGFARCE ELLNIDNLSD PEHEEVLHHL NQALKAHALM KRDRDYVVKD GQVIIVDEFT GRLMFGRRYS DGLHQAIEAK EGVKIERESQ TLATITFQNY FRMYEKLAGM TGTADTEAEE FKKIYGLDVV VVPTHKPMIR EDLPDAVFKT EEGKFRAVVE EIAARHATGQ PVLVGTISIE KSEVLSRMLT RRGIPHQVLN AKYHEKEAEI VAQAGRIGAV TIATNMAGRG TDIMLGGNPS FLALQEMRRR DYPPEVIAEA AEYGPCTEEV AEARRVYREL YAEFKKETDA EHDRVVALGG LFIIGTERHE ARRIDNQLRG RCGRQGDPGA TQFFVALNDD LLRLFGGDNI AGLMDRLKMD EDAPLEHPLI SKSLETAQRR VENRNFSIRK HVLNYDDVIN QQRELIYRQR RQVLCGEDLR PVVRQMMEEV AGQAVTAFAP EGVYPEEWNY EGLSEYMTQI LPGEKWTVED LEERLGKKRD DFRREDLRRL FLNEMEQAYA AREAELGAET MREIERVLML RIVDEKWMDH LDAMDQLREG VGLRAYGQKD PLVEYKFESF DMFQNMIASI QEETVKKLFR VRVVPPQQAE RRQVKENLYA AGGDGVKQPV RRDKKVGRNS PCPCGSGKKY KKCCAAKDEQ AAG
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