Gene Daud_2061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_2061 
Symbol 
ID6026275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp2172783 
End bp2174591 
Gene Length1809 bp 
Protein Length602 aa 
Translation table11 
GC content64% 
IMG OID641594882 
ProductGTP-binding protein LepA 
Protein accessionYP_001718183 
Protein GI169832201 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0481] Membrane GTPase LepA 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR01393] GTP-binding protein LepA 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGTGG AGCGCGACCG GATCCGCAAT TTTTGTATCA TTGCCCATAT CGACCACGGC 
AAGTCGACTC TGGCCGACCG GCTGCTGGAG TATACCGGGG CGCTTGTGGG GCGCCGGATG
CAGGAACAGG TGCTCGACCA GATGGACCTG GAGCGGGAGC GGGGCATCAC CATCAAACTG
CAGGCGGTGC GCCTGGCCTA CCGGGCCCGT GACGGCCGGG ATTACCAGTT GAACCTGATC
GACACCCCCG GGCACGTTGA CTTTTCCTAC GAGGTCTCCC GGAGCCTGGC GGCCTGCGAG
GGGGCGCTTC TGGTGGTCGA CGCCAGCCAG GGTATCGAGG CCCAGACGCT GGCCAACGTG
AACCTGGCCC TGGATCACAA CCTGACCATC ATCCCGATCA TCAACAAGAT CGACCTGGCG
AGTGCCGAAC CCGACCGGGT GCGGCGGGAA CTGGAGGACG TCATTGGCCT GGACGGCGCG
GACGCCGTAC TGGCTTCCGC GAAGCGCGGG GATGGGGTGG AGGAAATCCT GGAGCGGATC
GTCCGGGATG TCCCCCCGCC CGGCGGCGAT CCCGGGGCGC CTTTGCGGGC CCTGATTTTC
GACTCCCATT ACGATCCGTA CAGAGGGGTC GTCACTTACC TCCGGCTGAT GGACGGACGG
CTTTTCCCGG GCGGGCCGGT CCGGATGATG GCCACCGGCC GGGAGTTTGA GGTCAGCGAG
CTGGGCGTGT TTACGCCCGC GCCGGTGACG GTGAATGAAC TGCGTGCCGG GGAAGTCGGC
TTCATGGCCG CCGGGATCAA GAACGTCAAG GACTGCCGAG TGGGCGACAC GGTCACCGAC
GCCCGCCGCC CGGCTTCAAG CCCGCTGCCC GGGTACCGGA AGGCGAAGCC GATGGTGTAC
TGCGGTCTGT TCCCCGTGGA CGGGGCCGAG TTTGAAAAGG TGCGCGACGC TCTGGACCGG
CTTTCCCTGA ACGACGCCTC TCTGGTCTAC GAGCCGGAAA CCTCGACGGC GCTCGGTTTC
GGCTTCCGGT GCGGTTTTCT GGGGCTTTTG CACATGGAAA TCATCCAGGA GCGGCTGGAG
CGGGAGTACG GGTTGGACCT AATCACCACC GCACCCAGCG TGGTGTACCG GGTGACCCGG
ACGAACGGCG CCGTCTTGGA CATCCGGAAC CCGTCCGAAA TGCCCCCGGC TGGGGAAATC
GAGAAGATGG AGGAGCCCTT TGTGCTCACC TCGCTCCTTT TGCCCCAGGA CTACATCGGG
CCGGTGATGG AGCTGTGCCA GGACCGCCGG GGTGTGTTCC GGAACATGGA GTACATCAGC
ACCCACCGGG TGCTGATCAC CTACGAGATG CCCCTGGCCG AAATCATCTA CGACTTTTTT
GACCGCTTGA AATCCGCGAC CCGCGGCTAC GCCTCCATGG ACTACGACCT CCTGGGCTAC
CGGGAGTCCA AGCTGGTGCG CGTCGATATC CTGGTGGCCG GGGAACGGCT GGACGCCCTC
TCCATTATCG TCCACCGTGA CCGGGCCTAC CACCGGTCTA AGATCATCGT GGAACGGCTG
CGGGACCTCA TCCCGCGCCA GCTGTTCGAG ATCGTGATCC AGGCGGCCAT CGGGCAGCGG
GTGATCGCAC GGGAGAGCAT CCGCGCGCTG CGCAAAGCGG TGCTGGAAAA GTGCTACGGC
GGCGACGTCA CCCGCAAGCG CAAGCTCCTG GAGAAACAGA AAGAAGGCAA GAAGCGGATG
AAACAGGTGG GTCACGTTCA GATTCCCCAG GAGGCCTTTA TGTCGGTCTT GAGCATCGGA
CAGAAATGA
 
Protein sequence
MPVERDRIRN FCIIAHIDHG KSTLADRLLE YTGALVGRRM QEQVLDQMDL ERERGITIKL 
QAVRLAYRAR DGRDYQLNLI DTPGHVDFSY EVSRSLAACE GALLVVDASQ GIEAQTLANV
NLALDHNLTI IPIINKIDLA SAEPDRVRRE LEDVIGLDGA DAVLASAKRG DGVEEILERI
VRDVPPPGGD PGAPLRALIF DSHYDPYRGV VTYLRLMDGR LFPGGPVRMM ATGREFEVSE
LGVFTPAPVT VNELRAGEVG FMAAGIKNVK DCRVGDTVTD ARRPASSPLP GYRKAKPMVY
CGLFPVDGAE FEKVRDALDR LSLNDASLVY EPETSTALGF GFRCGFLGLL HMEIIQERLE
REYGLDLITT APSVVYRVTR TNGAVLDIRN PSEMPPAGEI EKMEEPFVLT SLLLPQDYIG
PVMELCQDRR GVFRNMEYIS THRVLITYEM PLAEIIYDFF DRLKSATRGY ASMDYDLLGY
RESKLVRVDI LVAGERLDAL SIIVHRDRAY HRSKIIVERL RDLIPRQLFE IVIQAAIGQR
VIARESIRAL RKAVLEKCYG GDVTRKRKLL EKQKEGKKRM KQVGHVQIPQ EAFMSVLSIG
QK