Gene Daud_2053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_2053 
Symbol 
ID6026833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp2163008 
End bp2164360 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content65% 
IMG OID641594874 
ProductMiaB-like tRNA modifying enzyme 
Protein accessionYP_001718175 
Protein GI169832193 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0621] 2-methylthioadenine synthetase 
TIGRFAM ID[TIGR00089] RNA modification enzyme, MiaB family
[TIGR01579] MiaB-like tRNA modifying enzyme 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGAAGG TCGCTTTTTA CACGTTGGGC TGCAAAGTTA ACCAGGCCGA GACGCAGGGG 
CTGGCCGCCC TTTTCCGGGA CCGCGGTTAT AAGGTCATCC CTTTCGAGGA AACGGCGGAC
GTGTACGTGG TGAACACCTG TACGGTGACC CGCGAGGGGG ACCGCAAATC ACGGCAGGTC
GTGCGCCGGG CGGTACGGGC TAATCCCGAG GCGCTGGTCG TGGTCACGGG CTGCTACGCC
CAGGTTGCTC CGGAAGAGGC GGGCGCCATC CCCGGGGTGA GTCTGGTCAT CGGCACGTCC
GGCCGGGAGC GGATCGTGGA CCTGGTGGAG CAGGCCGCCG CCCGGTGCCC CGTACCCGCC
GAAAAAAAGG GGCCTGGCCC CTTTTTGGCA GTGGGGGATA TTGAGCAGGC CCGGGAATTC
GAAGATTTGC CGGGAACAGC CGATCCGGGC CGGACCCGGG CCTTCATCAA GGTGCAGGAG
GGCTGCCGTG ATTTCTGCAC CTACTGCATC GTGCCTTACG CCCGCGGGCC CCTGCGTTCC
CGGCCTCCGG AGCGGGTGCT TGAGCTGGCC CGCGGGTTGG TGGACCGGGG GTACTCCGAA
CTGGTGCTCA CCGGGGTCAA CCTCGGGGCC TACGGCCGCG ACCTCGGCAC GGAGAACCTG
CCGGGTCTGG TGCGCCGCCT GGTCCGGATT CCGGGACTCG CCCGGTTGCG GCTGAGTTCG
GTGGAGCCGA ACGAGATCAC CCGGGAACTG GTCGAGGCGG TGGCGGAAAA CCCAGTGTGC
GCCCCGCATT TCCACATTCC GCTGCAGAGC GGGAGTGACT CGGTCCTCTC CAGGATGGGG
CGGCGTTATT CAACCGGGGA GTTTACCGGC CTGGTCGACA TGGTTCGTGC CAGGGTGCCG
GAGGTGGCCG TAACCGCCGA CGTCATGGTC GGTTTCCCGG GGGAAACCGC CGCCGAACAC
CGGGAGAGCT TAGAATATGT GCGCCGGATC GGTTTTGCCG GACTGCACGT TTTTGTCTAT
TCCCCGCGCC GGGGGACTCC CGCGGCCTCC TTCCCGGACC CGGTGCCCTA CCGCGTCAAG
AAGGAGCGCA GCCGGGAGAT GCTGGCGCTG GGCCGTGAGT TGCGGGACCG GTTTGCTTCC
CGCTACCGGG GGCGGACGGT GGAGGTGCTG GTGGAGTCTG TTTCCGGCGG CGTCGCTAGC
GGCTATACCC CAAATTATTT GCGGGTATTC TTCAAAAACG GACCCGAGCT TGCGGGGCGG
ATCGTAAAAG TGTATGCTGA CGGTGCAGAA CAGGGGAATT TAAGGGGAAT AATTCATACC
GAGGAAGGAT TCTCAGAGGC GAGTGTCAAA TAA
 
Protein sequence
MKKVAFYTLG CKVNQAETQG LAALFRDRGY KVIPFEETAD VYVVNTCTVT REGDRKSRQV 
VRRAVRANPE ALVVVTGCYA QVAPEEAGAI PGVSLVIGTS GRERIVDLVE QAAARCPVPA
EKKGPGPFLA VGDIEQAREF EDLPGTADPG RTRAFIKVQE GCRDFCTYCI VPYARGPLRS
RPPERVLELA RGLVDRGYSE LVLTGVNLGA YGRDLGTENL PGLVRRLVRI PGLARLRLSS
VEPNEITREL VEAVAENPVC APHFHIPLQS GSDSVLSRMG RRYSTGEFTG LVDMVRARVP
EVAVTADVMV GFPGETAAEH RESLEYVRRI GFAGLHVFVY SPRRGTPAAS FPDPVPYRVK
KERSREMLAL GRELRDRFAS RYRGRTVEVL VESVSGGVAS GYTPNYLRVF FKNGPELAGR
IVKVYADGAE QGNLRGIIHT EEGFSEASVK