Gene Daud_2035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_2035 
Symbol 
ID6026817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand+ 
Start bp2143360 
End bp2144391 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content66% 
IMG OID641594856 
ProducttRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 
Protein accessionYP_001718157 
Protein GI169832175 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 
TIGRFAM ID[TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCCACCG TGGCGGTTGC GCTGAGCGGG GGCGTTGACA GTTCAACCAC CGCCCTTTTG 
ATGAAAGAGG CCGGCCACCG GGTCTTCACC CTGACCATGG CCACGAACGA CCGGGTGGCG 
GCGGAGGCGG CGCGGGTATC CGCTTTCCTG GGCCTACCCC ACCACGTGCT GGACATAAGC 
GGGCTTTTTG AACAACGGGT GATCGGACCG TTCTGCGCCG CCTACCTAGA GGGGCGCACC 
CCCAACCCGT GCATCGCCTG CAACCGGGAC TTGAAATACG GGACGCTTTT CCGTCAAGCG 
GTCGAATGGG GCGCCGATTA TTTTGCGACC GGCCACTACG CCCGGGTGCG TTTTGAACCC 
GAACCGGGCC GGTATGTCCT GCTGCGCGCG CGCGACCCCC GTAAGGACCA GAGCTACGTC 
CTGTTTTACC TGGACCAGGA ACGGTTGGCC CGCCTGCTCC TGCCCCTGGG GGACTTGACG 
AAGGAAACGG TGCGCGAAAA GGCGCGGGCG GCCGGCATCC CCTTCACGGC GGCCGAAAGC 
CAGGAAATCT GTTTCGTAGC GGGGGACGAC TACCGGACGT TCATCCGCCG GCGGTGCGGA 
CAGGCGGTCG CGGAGGGGCC TTTCGTGGAC CGGCAGGGAA ACGTCCTCGG ACGGCACCGG 
GGCATACCAT TCTACACGAT CGGCCAGCGC CGGGGGCTGG GGCTGGCTCT GGGCCGGCCG 
GTGTTCGTGC TCGGTTTCAA CCGGGAGCGG AACGCGGTGA TTGTCGGTCC GGAAGAAGAA 
CTGTGGCATA CCGCATTCCT GGCGGTAGAT GTGCACTACA TCCTGCCGCA GCCCGCCGGA 
GGCACCCTCA TCGAAGCCCA GATCCGCTAC CGGGCCAAGG CCGCCCCCGC CCGCCTGTAT 
CCTCAGCCTC CCGACGCGGC CCGAGTCGTT TTCGAGAAGC CCCAGCGGGC AATCACCCCG 
GGACAAGCCG CCGTTTTCTA CCAGGGAGAG CGGGTGGTCG GCGGAGGCAT CATCAGTTGC 
GCCGTAAGGT GA
 
Protein sequence
MATVAVALSG GVDSSTTALL MKEAGHRVFT LTMATNDRVA AEAARVSAFL GLPHHVLDIS 
GLFEQRVIGP FCAAYLEGRT PNPCIACNRD LKYGTLFRQA VEWGADYFAT GHYARVRFEP 
EPGRYVLLRA RDPRKDQSYV LFYLDQERLA RLLLPLGDLT KETVREKARA AGIPFTAAES 
QEICFVAGDD YRTFIRRRCG QAVAEGPFVD RQGNVLGRHR GIPFYTIGQR RGLGLALGRP 
VFVLGFNRER NAVIVGPEEE LWHTAFLAVD VHYILPQPAG GTLIEAQIRY RAKAAPARLY 
PQPPDAARVV FEKPQRAITP GQAAVFYQGE RVVGGGIISC AVR