| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_2021 |
|---|
| Symbol | |
|---|
| ID | 6026608 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | - |
|---|
| Start bp | 2126655 |
|---|
| End bp | 2127407 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641594843 |
|---|
| Product | peptidase C26 |
|---|
| Protein accession | YP_001718144 |
|---|
| Protein GI | 169832162 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2071] Predicted glutamine amidotransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGACCGTGA TTGGAATCAC CTGTCTCCAG GAACACGAGC ACGGACAGGT TTTTTTGCCC
GAGTCTTACT TTCGGGCCGT GGAGCAGGCG GGGGGGGTTC CGGTTTTGCT GCCCCCGCTC
AGTCCAGGGC TCGGCGTGGG GCGTATGGTC GAACTGGTGG ACGGTATTCT TCTGGCCGGG
GGCGGGGATG TGGACCCGGT GTTCTTCGGT GAGGAACCGC TCCCCGACAC CGGCATAATC
ACCCCGGAGC GGGACCTCTT CGAAATCGCC CTGGTCCGGC GGGTTCTGCA CGCGGGCCGG
CCCGTTCTCG GCATCTGCCG GGGAATGCAG GTGCTAAACA TCGCCGCCGG CGGCGACATT
CACCAGGATG TGTCCCGGGC GGGGGCCCGG ATCAAGCACT ACCAGGAGGC GCCCCGGTGG
CACCCGACCC ACCGGCTGCA CGTGCGGCCC GGCTCGTTAT TGGCCCGGAT TCTGGGGGAG
GGCGCCTTGC GGGTGAACAG CCTGCACCAC CAGGCCGTCC GGCGCCTGGC GCCCGGCTTC
TCCGTTTCGG CCCAGGCGGG GGACGGGATT ATTGAGGCTG TGGAGGGGAC CGGTCCGGCC
TTTGTGCTTG GAGTGCAGTT CCACCCCGAA AGCATGTACG AACGCCATCC GGTGTTCTTG
AACCTTTTCG CCGCGCTGGT CGAGGCGGCC CACCACGCCT GGGGTGAAAA ACCGCTGCAG
GAAACGGCCG TCCGGAAGCA AACTATCCCG TAG
|
|---|
| Protein sequence | MTVIGITCLQ EHEHGQVFLP ESYFRAVEQA GGVPVLLPPL SPGLGVGRMV ELVDGILLAG
GGDVDPVFFG EEPLPDTGII TPERDLFEIA LVRRVLHAGR PVLGICRGMQ VLNIAAGGDI
HQDVSRAGAR IKHYQEAPRW HPTHRLHVRP GSLLARILGE GALRVNSLHH QAVRRLAPGF
SVSAQAGDGI IEAVEGTGPA FVLGVQFHPE SMYERHPVFL NLFAALVEAA HHAWGEKPLQ
ETAVRKQTIP
|
|---|
| |