Gene Daud_2015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_2015 
Symbol 
ID6025552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp2120323 
End bp2121039 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content68% 
IMG OID641594837 
Productpeptidase M22, glycoprotease 
Protein accessionYP_001718138 
Protein GI169832156 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1214] Inactive homolog of metal-dependent proteases, putative molecular chaperone 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.186434 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGTCC TGGGTATCGA TACCTCGGGA CCGTTTTGCA CCGTCGGTCT CGCCGGCTCG 
GACGGGGTTT TGGCCGAGCG GTCGGTCCGC GGACAAAAAA TCCATTCCGT GCGGTTGCTG
CCGCTGATTG AGGAGCTGTT GGACGATGCC GGTCTGTTGA AGGGGAACCT GGACGGCGTG
GCTGTTTCCG CCGGTCCCGG TTCCTTTACC GGCCTACGGG TCGGCCTGAC CACGGCCCGA
ACCCTGGCCC AGGTCCTTGA TATTCCGGTG GTGGGTGTGT CCTCGCTGGA TGTGCTGGTG
TACCCGCTTT GTGGGGCCCG GCGGGTCTGG GCGCTGGTGC CGGCGCGCCG CGGCGAGGTC
TACGCCGCCC TCTACGATTG CGGGGGCGGG GCCCCGGACA ACGTGTTCCC GCCGGCCGCG
CTGGAAATCG GCCGGTTGCT TGGGATTATT AAAGACGCCG CCGAGCCCCA GGTGTTTGTC
GGCGAGGGTG CGGAGTTGTA CGACGACCTG ATCCGGGGCG AACTGGGCGA AAGGGCCCGC
TTCTGCACCC CGGCGGGTAA TTACCCGCGG GGTGCGGTGG TCGCCTGGGT AGGGCGTGAA
GCGCTGCGGG AGGGCCGGGG CCGGGAGGCC TTCTCCCTCG TCCCGGAGTA CATCAGCCCG
CCGGCGGCCG AACTGGTCTG GCAGCAGAAA GCGGGGGGTG AGGAGAGTTG GCGATGA
 
Protein sequence
MNVLGIDTSG PFCTVGLAGS DGVLAERSVR GQKIHSVRLL PLIEELLDDA GLLKGNLDGV 
AVSAGPGSFT GLRVGLTTAR TLAQVLDIPV VGVSSLDVLV YPLCGARRVW ALVPARRGEV
YAALYDCGGG APDNVFPPAA LEIGRLLGII KDAAEPQVFV GEGAELYDDL IRGELGERAR
FCTPAGNYPR GAVVAWVGRE ALREGRGREA FSLVPEYISP PAAELVWQQK AGGEESWR