| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_2014 |
|---|
| Symbol | |
|---|
| ID | 6026577 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | - |
|---|
| Start bp | 2119844 |
|---|
| End bp | 2120326 |
|---|
| Gene Length | 483 bp |
|---|
| Protein Length | 160 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641594836 |
|---|
| Product | ribosomal-protein-alanine acetyltransferase |
|---|
| Protein accession | YP_001718137 |
|---|
| Protein GI | 169832155 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0456] Acetyltransferases |
|---|
| TIGRFAM ID | [TIGR01575] ribosomal-protein-alanine acetyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00106333 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGTCCC GGCCCCTGCC CGGAGTGCGG TTTGACAACC TGACCTTGCA GCATCTGGAC
CAGGTTTTGG TCATCGAGGA GTACTCCTTT CCTACTCCCT GGCCCCGGCA GACCTTTGAG
TTTGAGATCC TTTACAATGA ACTGGCCGAA TATGTGGTGG CCGTTGTGAA TCACAAAGTG
GTGGGTTACG GGGGCATGTG GATGGTGCTG GACGACGCCC ACATCACCAA CGTCGCCGTA
CACCCGATTT ACCGGGACCG GGGTATCGGC CGGGGCCTGA TGCTGGAGTT GATGCGCCGG
GCCGTGCTCC GGGGGGCGAA ACGGATGACC CTGGAGGTGC GCCCCTCGAA CCAGCCCGCC
CGGCACCTGT ACAAGGATCT CGGATTCGAG GAGCGCGGCA TCCGCCCCAA GTACTACCAG
GACAACAACG AGGACGCCAT CATCATGTGG AAAGACGACC TGAAGCGGAC CTTCCTGAAA
TAG
|
|---|
| Protein sequence | MTSRPLPGVR FDNLTLQHLD QVLVIEEYSF PTPWPRQTFE FEILYNELAE YVVAVVNHKV
VGYGGMWMVL DDAHITNVAV HPIYRDRGIG RGLMLELMRR AVLRGAKRMT LEVRPSNQPA
RHLYKDLGFE ERGIRPKYYQ DNNEDAIIMW KDDLKRTFLK
|
|---|
| |