Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_1957 |
Symbol | |
ID | 6025889 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | - |
Start bp | 2063327 |
End bp | 2064049 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641594775 |
Product | phosphodiesterase |
Protein accession | YP_001718080 |
Protein GI | 169832098 |
COG category | [R] General function prediction only |
COG ID | [COG0622] Predicted phosphoesterase |
TIGRFAM ID | [TIGR00040] phosphoesterase, MJ0936 family |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGAATCG CCGTCATTTC CGACATTCAC GCCAACCTGC ATGCCCTGGA GGCCGTGCTG CGGGATATCG AAAGAGAGGG CGTGGACGAG ATCCTGTGCG CCGGTGACCT GGTCGGCTAC GGACCCCACC CGAACGAAGT GGTGGAGCGG ATCCGGACCC TCGATATCCG CGGCGTACAG GGCAATTACG ACGAAGCCGC GGCCAACGCC CGGCTGGTCT GCGGTTGCGA CTACCCCGAC CCGGAGAGCA TGGCGGTGGG CGCCGCCGCC CTGGCCTGGA CCGTTAGGGA ACTGGGCGCG GAAAACAAAG AGTATTTGCG CGGACTGCCG GCGAGACTCC GGTTCCAGGC CGGTGCCCAC GATGTTCTGC TCGTGCACGG CAGCCCCCGG CGAATCAACG AGTACCTGTA CGAAGACGCC GCCCCTGATG TGCTGCGGGA AATCTTCCGG GAGTGGCCAG CCGGCGTCCT GATCGTCGGG CACACCCACC GGCCCTACCA CCGGCGGTTT GAAGGCCGGC ACGTAGTCAA CGCCGGTAGC GTGGGCCAGT CCCGGGATGG CGATCCCCGA AGCAGCTATG TCCTGGTGGA CTTCGGCGCC GGCCCAGGGG TGCGGGTCGT CCGGGTGCCC TATGACGTGG AGGCGACCGC CGCCGGTGTG CTTCGGGCCG GCCTGCCCCT GGAACTGGCC CAAGCCCTCC GGGGCGGGAG TTCCTACAAA TAA
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Protein sequence | MRIAVISDIH ANLHALEAVL RDIEREGVDE ILCAGDLVGY GPHPNEVVER IRTLDIRGVQ GNYDEAAANA RLVCGCDYPD PESMAVGAAA LAWTVRELGA ENKEYLRGLP ARLRFQAGAH DVLLVHGSPR RINEYLYEDA APDVLREIFR EWPAGVLIVG HTHRPYHRRF EGRHVVNAGS VGQSRDGDPR SSYVLVDFGA GPGVRVVRVP YDVEATAAGV LRAGLPLELA QALRGGSSYK
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