Gene Daud_1957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_1957 
Symbol 
ID6025889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp2063327 
End bp2064049 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content67% 
IMG OID641594775 
Productphosphodiesterase 
Protein accessionYP_001718080 
Protein GI169832098 
COG category[R] General function prediction only 
COG ID[COG0622] Predicted phosphoesterase 
TIGRFAM ID[TIGR00040] phosphoesterase, MJ0936 family 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAATCG CCGTCATTTC CGACATTCAC GCCAACCTGC ATGCCCTGGA GGCCGTGCTG 
CGGGATATCG AAAGAGAGGG CGTGGACGAG ATCCTGTGCG CCGGTGACCT GGTCGGCTAC
GGACCCCACC CGAACGAAGT GGTGGAGCGG ATCCGGACCC TCGATATCCG CGGCGTACAG
GGCAATTACG ACGAAGCCGC GGCCAACGCC CGGCTGGTCT GCGGTTGCGA CTACCCCGAC
CCGGAGAGCA TGGCGGTGGG CGCCGCCGCC CTGGCCTGGA CCGTTAGGGA ACTGGGCGCG
GAAAACAAAG AGTATTTGCG CGGACTGCCG GCGAGACTCC GGTTCCAGGC CGGTGCCCAC
GATGTTCTGC TCGTGCACGG CAGCCCCCGG CGAATCAACG AGTACCTGTA CGAAGACGCC
GCCCCTGATG TGCTGCGGGA AATCTTCCGG GAGTGGCCAG CCGGCGTCCT GATCGTCGGG
CACACCCACC GGCCCTACCA CCGGCGGTTT GAAGGCCGGC ACGTAGTCAA CGCCGGTAGC
GTGGGCCAGT CCCGGGATGG CGATCCCCGA AGCAGCTATG TCCTGGTGGA CTTCGGCGCC
GGCCCAGGGG TGCGGGTCGT CCGGGTGCCC TATGACGTGG AGGCGACCGC CGCCGGTGTG
CTTCGGGCCG GCCTGCCCCT GGAACTGGCC CAAGCCCTCC GGGGCGGGAG TTCCTACAAA
TAA
 
Protein sequence
MRIAVISDIH ANLHALEAVL RDIEREGVDE ILCAGDLVGY GPHPNEVVER IRTLDIRGVQ 
GNYDEAAANA RLVCGCDYPD PESMAVGAAA LAWTVRELGA ENKEYLRGLP ARLRFQAGAH
DVLLVHGSPR RINEYLYEDA APDVLREIFR EWPAGVLIVG HTHRPYHRRF EGRHVVNAGS
VGQSRDGDPR SSYVLVDFGA GPGVRVVRVP YDVEATAAGV LRAGLPLELA QALRGGSSYK