Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_1955 |
Symbol | |
ID | 6026246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | + |
Start bp | 2060346 |
End bp | 2062082 |
Gene Length | 1737 bp |
Protein Length | 578 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641594773 |
Product | transposase |
Protein accession | YP_001718078 |
Protein GI | 169832096 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG5421] Transposase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGATAAGTT GGGTATTGTC GAATCACTGG TACACGTGCT ACAATATAGA TATGTATATC CGCACTACCG TCCGCAAGAA CAAAAACGAA ACCCAAACCT GCTACGTGCA ACTGGCCCAC AATACTTGGA ACCCTGAAAC ACGTCGTTCC GAGGTCCAGG TGCTCTACAA CTTCGGCCGT GCAGAAAACG TGGACCGCGC GGGCCTGGAG CGCCTGGCCC GGAGTATTTG CCGCTACCTG GGGCCGGATG AGTTGCTGCG CTTTGAAGCC CGCCGCAACT ACGGTACGGA ATTCGGGTTT GAAAGTTCCA AGCCCTTCGG TGGCGCCTGG GTACTGCAAG GACTATGGAA ACACCTGGGT GTGGACCGGA TTCTTACGCA ACTGCTCAAA GAACGCAAGT TCCAGAGCCC GGTGGAACGG ACCATTTTCG CCCTGGTGGC CAACCGGGCC CTGGCTCCCA TGAGCAAGCG CGCCGTGGAA GAGTGGGTGG CCCAGGACGT ATACATCCCG GACTTGCCGG AGATCCCGCT CCACCACCTC TACCGGGCCA TGGACTTCTT GCTGGAGGCC GAGGAATCCT TGCAGTACCA AGTCTTTTGT CAAGTCAGCC ATCTCTTTAA TCTGGAGGTG GACCTTTTGT ACTTTGACAC CACCTCCACT TACTTCGAGA TCGAAACCGA AGATGACGAG GGTTTAAGGC GTAAGGGTCA CTCCAAGGAC TCCCGGCCGG ATCTGCCCCA AGCGGTGATC GGTCTCGCGG TGACCAGGGA CGGTATCCCG GTACGCTGCT GGGTATGGCC GGGCAACACC GCCGATATGT CCGTGGTCCA GGAGGTCAAA AAAGACCTCG TGGGCTGGAA GCTTGGCCGG GTGATCACCG TCCTGGACCG CGGCATGGCT TCCGAGGAGA ACCTGCGCTA TCTGCAAAGG GCCGGCGGCC ACTACATTGC CGGCGAGCGC ATGCGGGCCG GCAAGAACAC GGTGGAAAAG GCGCTTTCCC ACCCGGGCCG CTTCAAGACC GTGCGCGACA ACCTGGAGGT CAAGGAGATC GTCATCGGCG ACGGCGAGGC CAGCACCCGC TACGTCCTGG TCCGCAACCC CGAGGAGGCC GAGTGGGACA AGGCCAAGCG CGAAGAGACC CTGGACAAAC TCAAGCTTGA GTTGGCCCGT ATCGGCGAAC TAAACGGTGC GCCCCACACC AAGGCGGTCT GCAGTATCAT CGCTCACCCC ACCTACGGCC GCTACCTCAA GACCGACAAG CGCGGCCAAC CCCGGATCGA CAAGGACAAG ATCAAGGCCG AGGAACGCCT GGACGGCAAG TACCTCCTGC GTACTTCAGA TGACACCCTC GCCCCGGAGG ACGTGGCCCT CGGCTACAAG CAGTTGCTGC AGGTGGAGGA TGCCTTCCGC ACCCTGAAGA GCACCCTGGA GCTGCGGCCC GACCACCCTT CGGGTGGTAC CCGCCACCGG CTGGAGGACC GCATCCGTGC CCACGTGCTG CTCTGCTGGT TGGCCCTGCT CCTGGTCCGG ATAGCGGAGA ACCAAACTGG ACAGACCTGG CGCACCATCC GTGCACACCT GCAGCGAATG CACGTGGGTG AGTTCCAGTT CCCCACGGCA CGTGTGCATC AGCGCACTGA AACAGAACCT GATCAACACC AATTGTTCAA AGCCCTGAAA ATCCCCCAAC CCCCGAAAAT ACTGAACATC ACTACTTCTG ACTGCCGGAT AACCTAG
|
Protein sequence | MISWVLSNHW YTCYNIDMYI RTTVRKNKNE TQTCYVQLAH NTWNPETRRS EVQVLYNFGR AENVDRAGLE RLARSICRYL GPDELLRFEA RRNYGTEFGF ESSKPFGGAW VLQGLWKHLG VDRILTQLLK ERKFQSPVER TIFALVANRA LAPMSKRAVE EWVAQDVYIP DLPEIPLHHL YRAMDFLLEA EESLQYQVFC QVSHLFNLEV DLLYFDTTST YFEIETEDDE GLRRKGHSKD SRPDLPQAVI GLAVTRDGIP VRCWVWPGNT ADMSVVQEVK KDLVGWKLGR VITVLDRGMA SEENLRYLQR AGGHYIAGER MRAGKNTVEK ALSHPGRFKT VRDNLEVKEI VIGDGEASTR YVLVRNPEEA EWDKAKREET LDKLKLELAR IGELNGAPHT KAVCSIIAHP TYGRYLKTDK RGQPRIDKDK IKAEERLDGK YLLRTSDDTL APEDVALGYK QLLQVEDAFR TLKSTLELRP DHPSGGTRHR LEDRIRAHVL LCWLALLLVR IAENQTGQTW RTIRAHLQRM HVGEFQFPTA RVHQRTETEP DQHQLFKALK IPQPPKILNI TTSDCRIT
|
| |