Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_1920 |
Symbol | |
ID | 6026761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | - |
Start bp | 2021205 |
End bp | 2022782 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641594739 |
Product | hypothetical protein |
Protein accession | YP_001718045 |
Protein GI | 169832063 |
COG category | [S] Function unknown |
COG ID | [COG1322] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0785962 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTGAGG CCGGGCTTTT TGTTCTGTTT TTGTTGATCG GACTGGCCCT CGGGGCGGCC GGCGCCTGGC TGGCGCTGCG CCACCGGGCG GCCGCGGCCG CGGCGCAGGC CCGGTCCGCC GGCGAAGCGG AGCGGTCGGT GCTGGCGGCC CGGCTGGAGG TCGCGGAGCG GCGGAGCGCG GAACTCGCCG CCGGGGCCGC CGAGCGGGAG GCGCGTCTCG ATCAACTCCA ACAGGAATTA GCCGGTGAGT TGGCGCGGCG GGCAGCCGCT GAGGAGTCGG CCCGGCGGAT ACCGGCCTTG GAAGCCGAGA TCGAGGCGCG GGAGGCCCGG CTCACGGCGG CGAACCAGTC AATCAGCGAC CTCAGGTCCC GGGTGGCGGA ACTGGAGACC ACCGTGGAAA AGGAGCGCCA AGCCGCGGCG GAGAAGCTCC GCCTGCTGGA CGAGGCCCGG CAGAAGCTCA CGGACGCCTT CAAGGCCCTC TCGGCCGAAG CGCTGACCAG TAATAGCCGG GCCTTTCTGG ATCTGGCCCG GATCACCCTG GAGAAGTACC AGGAAGCGGC CCGGGGAGAC CTGGAAAAAC GGCAGCAGGC GATCTATGAG CTGGTTAAGC CCGTTCGGGA ATCCCTGGAC AAGGTGGACA CCGAAATACG CCAGTTGGAA AAGGCGCGGG TGGGGGCCTA CGAGGCGCTG CAAGAGCAGG TCCGTTCCTT GCTTGAGACC CAGCACCAGC TGCGCTCGGA GACCTCGAAC CTGGTGCGTG CCCTGCGCAC GCCCGTGGCG CGCGGCCGCT GGGGCGAGAT CCAGCTCAAG CGCGTGGTGG AAATGGCTGG GATGCTGGAG CACTGCGATT TCTACGAGCA GGAGAGCGTG GATACCGGCG AGGGCCGGCT GCGTCCGGAC CTGCTGGTCC GGCTGCCCGG CGGGAAAAAC ATCGTTGTGG ACGCCAAGGC GCCCCTCGGC GAGTACCTGG AGGCCGTCGG CGCGGAAGAT GACGGGGTGC GCCGGGAGAG ACTCCAGAAC TATGCCCGCC TGGTGCGTAA ACACATGGCC GAACTCGGCA AGAAGTCCTA CTGGGACCAG TTTCAGCCGG CACCCGAATT CGTGGTGCTC TTTTTGCCCG GAGAGATGTT TTTCAGCGCG GCGCTCCAGC ACGACCCGGC GCTCATCGAG TTCGGCGTCG AGCAACACGT GATTCCGGCG ACGCCGACCA CCCTGATCGC GCTCCTGCGG GCGGTGGCCT ACGGCTGGCG GCAGGAGCGG CTGGCCCAAA ACGCCAGGGA GATCAGCGAC CTGGGGCGCG AGCTTTACAA ACGGCTTTCC GATATGGGCG GCCACATGGC CAGGCTCGGC AAAAACCTGG GGAACGCCGT GGACGCCTAC AACAAGACGG TAGGCTCGTT AGAGTCCCGG GTGCTGGTCA GCGCGCGCCG GTTCAAAGAC CTGGACGCGG CCTCCGTAGG CGTGGATCTG GGTGAATTGA ACCCGGTCGA ACAATCGGCC CGTGCCGTCC AGGCTCCGGA ACTCCTGGCC CCGGCCGGCG GATCGGACGA GGCGGCTGCG GCCGGGGAGG ATGAATAA
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Protein sequence | MGEAGLFVLF LLIGLALGAA GAWLALRHRA AAAAAQARSA GEAERSVLAA RLEVAERRSA ELAAGAAERE ARLDQLQQEL AGELARRAAA EESARRIPAL EAEIEAREAR LTAANQSISD LRSRVAELET TVEKERQAAA EKLRLLDEAR QKLTDAFKAL SAEALTSNSR AFLDLARITL EKYQEAARGD LEKRQQAIYE LVKPVRESLD KVDTEIRQLE KARVGAYEAL QEQVRSLLET QHQLRSETSN LVRALRTPVA RGRWGEIQLK RVVEMAGMLE HCDFYEQESV DTGEGRLRPD LLVRLPGGKN IVVDAKAPLG EYLEAVGAED DGVRRERLQN YARLVRKHMA ELGKKSYWDQ FQPAPEFVVL FLPGEMFFSA ALQHDPALIE FGVEQHVIPA TPTTLIALLR AVAYGWRQER LAQNAREISD LGRELYKRLS DMGGHMARLG KNLGNAVDAY NKTVGSLESR VLVSARRFKD LDAASVGVDL GELNPVEQSA RAVQAPELLA PAGGSDEAAA AGEDE
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