Gene Daud_1911 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_1911 
Symbol 
ID6025597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp2015590 
End bp2016240 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content49% 
IMG OID641594729 
ProductDNA binding domain-containing protein 
Protein accessionYP_001718036 
Protein GI169832054 
COG category[L] Replication, recombination and repair 
COG ID[COG2452] Predicted site-specific integrase-resolvase 
TIGRFAM ID[TIGR01764] DNA binding domain, excisionase family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAGC TCTATCCGAT GCATGAAACA ATGAAAATCC TAGGTGTATC TTTAAAAACA 
CTCCAGCGCT GGGATAAAGC GGGCAAAATA AAAATTGTTC GCACTCCCGG CGGTAGGAGG
AGGATCCCCG AATCTGAGAT CAAAAGGCTA CTTGGGGAAA AGGAACCGGT GTCTGCCGGC
CGGGTGCTGG CCATTTACGC CCGGGTTTCT TCCCACGAGC AGAAAGCCAA AGGAGACCTG
GACAGGCAAG TTGAGTCGGT CAGGAAGAAA TTCGACCACC GCCTCTTCGA CGATATTCTG
GTGGTCACCG ACGTTTCCTC CGGCTTAAAT GACAGAAGAA AGGGTCTGCT AAAACTGATG
CAGTTAGCCC GCAAAGGCAA AATAACCGAC CTGGCCGTAA GCTACAAAGA CAGGCTGACC
CGTTTCGGTT TCAACTACCT GAAAACCTGT TTTGAAAGCT ATGGCGTGAA AATCCACGTC
ATAAATGGTG AAGGAGACAA GAAAACGGTT TACGAAGAAC TGGTGGAAGA CCTCCTCAGT
ATCGTCACCA GTTTTTCCGG AAAGCTCTAC GGCATCAGGA GTAAGAAAAA AGAAGAAGTG
ACCTCAAAAA TAAGGGAGGT GATTGAAAAT GCAGGCCACC TACCGGGCTA G
 
Protein sequence
MEKLYPMHET MKILGVSLKT LQRWDKAGKI KIVRTPGGRR RIPESEIKRL LGEKEPVSAG 
RVLAIYARVS SHEQKAKGDL DRQVESVRKK FDHRLFDDIL VVTDVSSGLN DRRKGLLKLM
QLARKGKITD LAVSYKDRLT RFGFNYLKTC FESYGVKIHV INGEGDKKTV YEELVEDLLS
IVTSFSGKLY GIRSKKKEEV TSKIREVIEN AGHLPG