Gene Daud_1874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_1874 
Symbol 
ID6026193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand- 
Start bp1973898 
End bp1974461 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content61% 
IMG OID641594692 
Productsignal transduction histidine kinase regulating citrate/malate metabolism 
Protein accessionYP_001717999 
Protein GI169832017 
COG category[T] Signal transduction mechanisms 
COG ID[COG3290] Signal transduction histidine kinase regulating citrate/malate metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0122256 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCGGAAG AGTTGCTGCG GTTCATCCGG AACTACAGCC ACGACTTTCA AAACCACCTG 
CAGGTCATTT CGGGGCTGGC GCAGTTGAAT AGAACCGAGC GCATCCGTGA ATACATCGGA 
CAGATATCGG GTCAGCTCAG GGAAATCACC AAAATCGCGG TCATCGACCC CCCGGAACTG 
GCAGCCGCCC TGCTTGCCTT CCAGCAGCAG GTGACCAGGT ACGGGGTTCC CGTGTTGGTC 
GAAGTGCAGG CCGTGGCATC CGCAGAATGG CCGGCGGCGC CAGGGAACGA GGCGCCCTTG 
CGGCAGGCTT TCGGGGAACT TGGGGCCTTG ATGGGTTTCC TCGAAGGGAG TACCGGGCCG 
GTGGCGCTGC AAGTGGCAAA AACCGAGGAG TACCTCATCT GTGACCTTGA TCTGCCCCTT 
GCCGGGGGCA TATCCGTTGC GGAACTGGAA AGAAACCTGG TGCCGGTCAA CGGACTGCTC 
GAACCACTGG GCGCGCGGGC CGGCGTGGTC GAAACCGGCT TTGGTCTTCA GATCAGGCTT 
GAATTTCCCC GGGGGGAGGG ATAA
 
Protein sequence
MSEELLRFIR NYSHDFQNHL QVISGLAQLN RTERIREYIG QISGQLREIT KIAVIDPPEL 
AAALLAFQQQ VTRYGVPVLV EVQAVASAEW PAAPGNEAPL RQAFGELGAL MGFLEGSTGP 
VALQVAKTEE YLICDLDLPL AGGISVAELE RNLVPVNGLL EPLGARAGVV ETGFGLQIRL 
EFPRGEG