| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1873 |
|---|
| Symbol | |
|---|
| ID | 6027449 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | - |
|---|
| Start bp | 1972616 |
|---|
| End bp | 1973893 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641594691 |
|---|
| Product | small GTP-binding protein |
|---|
| Protein accession | YP_001717998 |
|---|
| Protein GI | 169832016 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0536] Predicted GTPase |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR02729] Obg family GTPase CgtA
[TIGR03595] Obg family GTPase CgtA, C-terminal extension |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.492878 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTTCAAGG ACTACGCCAA AATACATGTC AAGGCTGGGG ACGGCGGAAA CGGCTGTGTC
GCCTTCCGGC GTGAAAAGTA CGTCCCCTAC GGCGGCCCTT CGGGAGGGGA CGGCGGCCGG
GGCGGGCACG TTATCCTCCG GGCCGACGGC GGCCTGCGCA CGCTGGTCGA TTTCCGGTAC
CGCACCCACT ACAAGGCCGG CCGGGGGACC CACGGCCAGG GCAAGAACAT GCACGGGCGT
AAGGGCGAGG ACCTAGTCTT GCGGGTGCCG GTGGGCACGG AGGTTCGCCG GGCCGGAGAC
GCAACCCTGA TGGCCGACCT CACGGTCGAC GGGCAGGAGT ACCGGGTGGC CCGCGGCGGC
CGGGGCGGCC GGGGAAACGC CCGCTTTGCC GCCGCCAACC GCCGGGCACC CAGTTTTGCC
GAGAAGGGTG AGCCCGGCGA GGAACTCTGG CTGGAACTGG AACTTAAACT TTTGGCCGAC
GTCGGGCTGG TCGGGTTCCC GAACGCCGGC AAGTCGACCA TCATTTCGAA GGTGTCCGCG
GCCCGGCCCA AGATCGCGGA CTACCCCTTC ACCACCCTGG AACCGCACCT GGGCGTGGTG
CGCGTGGGCG AGGGCGAGAG CTTTGTACTG GCCGACATCC CCGGGCTGAT CGAGGGCGCC
CACCGGGGTG CCGGCCTGGG TCACCGGTTT TTGCGGCACG TGGAACGCAC CCGGGTCCTG
ATCCACGTGG TTGATGTTTC CGGCCGCGAG GGCCGGGACC CGGTGGCCGA TTTTGAGGCC
ATCAACCGGG AACTGGCCGC CTACGACCCC CGCCTGGCCG CCCGTCCGCA GCTGGTGGCG
GCCAACAAAA CCGACCTGCC CGGGGCGCGT GATAACGCCC GGCGCCTGGC GGAGGCCGCC
GGCGGGCGTT ACGAGGTGTT CGAGATCTCG GCGCTCACCG GTGAGGGCCT GGACCGGCTG
ATCTACCGGA CTTACCGTTT GCTGGAGACC ATCCCGGTGG AACCGGCGCC TGCCCCCATT
GTTCCGGACG AGCGGGAGAC GGATGTGACT CTGTTCCTGG TCGCCAGGGA GGGGAACACC
TACGTGGTGG AAGGAGAAGG GATTGAGCGC CGGGTGGCGA TGACCGACCT GGATAACCCG
GAGGCCGTGC AGCACCTGCA GGAACTGCTC GTCCGAATTG GAGTGGAGGA CGCCCTGCGG
GCGGAAGGAA TCAGGCCGGG CGACAACGTC CGCATCGGCC GGTTTGAATT CGAGTACAGC
GAGAACCCTA CCGGTTAA
|
|---|
| Protein sequence | MFKDYAKIHV KAGDGGNGCV AFRREKYVPY GGPSGGDGGR GGHVILRADG GLRTLVDFRY
RTHYKAGRGT HGQGKNMHGR KGEDLVLRVP VGTEVRRAGD ATLMADLTVD GQEYRVARGG
RGGRGNARFA AANRRAPSFA EKGEPGEELW LELELKLLAD VGLVGFPNAG KSTIISKVSA
ARPKIADYPF TTLEPHLGVV RVGEGESFVL ADIPGLIEGA HRGAGLGHRF LRHVERTRVL
IHVVDVSGRE GRDPVADFEA INRELAAYDP RLAARPQLVA ANKTDLPGAR DNARRLAEAA
GGRYEVFEIS ALTGEGLDRL IYRTYRLLET IPVEPAPAPI VPDERETDVT LFLVAREGNT
YVVEGEGIER RVAMTDLDNP EAVQHLQELL VRIGVEDALR AEGIRPGDNV RIGRFEFEYS
ENPTG
|
|---|
| |