Gene Daud_1859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_1859 
Symbol 
ID6027189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp1956384 
End bp1957157 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content62% 
IMG OID641594674 
Productcobalt ABC transporter, inner membrane subunit CbiQ 
Protein accessionYP_001717984 
Protein GI169832002 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters 
TIGRFAM ID[TIGR02454] cobalt ABC transporter, permease protein CbiQ 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATTGACC GGTGGGCATA CGCCAGTCCC CTGGCGCGCA GGCACCCCCT GGAAAAAGGC 
GTGCTCGTGC TCCCGGCGCT CGCCGCCTGC CTGGTGGCGA AGTCCTGGTG GGTACCGGTA
TTGGTTTTCG GGTCTATGTC CGTCCTGATC CTGGCCGTGG CTCTTGTACC CTGGCGGGTT
TATCTGCGCC TCCTGCTGGT GCCTGTCGCG TTCCTGGCCG CCAGCCTGCC TGCTATAGCC
CTTTCAGTGA CCTTTGCACC TTCGGGGGAG GGTTACTGGA TAACGCTTGG TAGTGCTTAT
GTGGGTTTTA CGTCAGACGG ACTGGCCCAA GCGCGTAACG TTATGGCCCG TTCCTTGGGT
GCTGTCTCCT GTATGTGCTT CCTTGCTCTG TCCACGCCGA TGCCCGACAT AATCGGTTTC
TTAAGGCGCT GCCGGGTACC GACGCTGTTC TTGGATCTCC TGGCCCTCAT CTATCGTTTT
GTGTTCATTC TTCTGGAAAC CGGGTTGACG ATGCAGAAGG CTCAGGCGCT GCGTCTGGGT
TACAGCACGC CGGGCGCCGG CTGCCGATCG GCCGGCTGCC TGCTCACCAA TCTCTTTGTG
CGGACTCAAG ACCGCGCTCG CAGCCTGGAG GTCGCCCTTG CCACGAGGGG CTACGAAGGC
CGTTTAAACG TGCTGGAGAG GCCGTGCCGC TTATCGGCGC GCAATGTGGT ACTGTCGGCG
GTCATGGGCG GGTGGCTGCT TGTCCTGGCT GTTGTGACTG CGGGGGTTGG CTAG
 
Protein sequence
MIDRWAYASP LARRHPLEKG VLVLPALAAC LVAKSWWVPV LVFGSMSVLI LAVALVPWRV 
YLRLLLVPVA FLAASLPAIA LSVTFAPSGE GYWITLGSAY VGFTSDGLAQ ARNVMARSLG
AVSCMCFLAL STPMPDIIGF LRRCRVPTLF LDLLALIYRF VFILLETGLT MQKAQALRLG
YSTPGAGCRS AGCLLTNLFV RTQDRARSLE VALATRGYEG RLNVLERPCR LSARNVVLSA
VMGGWLLVLA VVTAGVG