| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1856 |
|---|
| Symbol | |
|---|
| ID | 6025913 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | - |
|---|
| Start bp | 1953142 |
|---|
| End bp | 1954251 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641594671 |
|---|
| Product | cobalamin biosynthesis protein CbiD |
|---|
| Protein accession | YP_001717981 |
|---|
| Protein GI | 169831999 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1903] Cobalamin biosynthesis protein CbiD |
|---|
| TIGRFAM ID | [TIGR00312] cobalamin biosynthesis protein CbiD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGGCG GTGGCGGCCG GGGGAGGGGA CAAAAACGAT TTTGCCGCAA CAGCGGCCTG
CGGCGAGGTT ACACGACCGG AACGTGCGCG GCGGCGGCGG CGCGGGGCGC CGCCCTCTGG
CTGCTCGAGG GGCGCTTTCC CGAAAGGGTC GCGATTCTTT TGCCCGGCGG TGAACAGGTA
ACCCTCCCGG TGCATGCGGT CTTCCGCGGC ACGTCCGCCG CCCAGTGTTG CGTGATTAAG
GATGCGGGTG ATGACCCCGA CGTAACCGAC GGGATGGCCA TCCACGCCCA CGTCGAATTT
GCCGCCGCCC CGGGCGTTGT CATCGACGGG GGGGAGGGCG TGGGGCGCGT CACCAAACCG
GGCCTTCCCG TCCCGGTGGG CGAGGCCGCG ATCAATCCCG TGCCGCGGGC GATGATCGCC
GGCGCGCTGG CCGGCCTTGT TCCCACCGGC GGGGGCTGGA AGGTTACCGT TTCCGTTCCG
GGAGGGGATA ATGTCGCCTG GCGCACCTTT AATCCGCGGC TGGGCATTGC CGGGGGCATC
TCGATTCTCG GCACCACCGG CTATGTCGAG CCGCGCAGCC TCGACGCCCT GCGGCGCTCG
CTCCCGCCGC TCCTGGACGT CCTGCGCGCC TCCGGCTGCG GGGAGGTCTG CCTGGTCCCG
GGCAACATCG GCCGCCGGGC GGCGCGGCGC TTGCAGCCGC CGCCCGCGGA GGAGCAGATC
GTTGAGGTCA GCGACTTCCT GGGTTTCATG CTCGACGAGG CATCCCAGCG GGGTTTTGCC
CGGATCGTCC TCGTCGGGCA CCCGGGTAAG CTGGCCAAGA TCCTGAACGG GGACTGGCAG
ACGCACTCCA GATTTGCCGG GCCGGCCAAC GGCGCCATCA TCGACTTCTG TGCTGCTGCC
GGCCTGCCGG AAGACCTCAT CCGGCGTTTG GGGGAACTGT CGACGGTGGA AGCGATCCAG
CAGGCGCTGA TTAATGAAGG GTACGGCCGT TTACTCGGGA TGCTGGCGTC CAGGATCAGG
GTTCTCGTGC AAGAAAGGCT GGGCCCGGGA CCTTACGTGG CGGTGCATCT CTGCGACCTG
CAGGGGAACA TCGTGGGGGA GGCGCCATGA
|
|---|
| Protein sequence | MNGGGGRGRG QKRFCRNSGL RRGYTTGTCA AAAARGAALW LLEGRFPERV AILLPGGEQV
TLPVHAVFRG TSAAQCCVIK DAGDDPDVTD GMAIHAHVEF AAAPGVVIDG GEGVGRVTKP
GLPVPVGEAA INPVPRAMIA GALAGLVPTG GGWKVTVSVP GGDNVAWRTF NPRLGIAGGI
SILGTTGYVE PRSLDALRRS LPPLLDVLRA SGCGEVCLVP GNIGRRAARR LQPPPAEEQI
VEVSDFLGFM LDEASQRGFA RIVLVGHPGK LAKILNGDWQ THSRFAGPAN GAIIDFCAAA
GLPEDLIRRL GELSTVEAIQ QALINEGYGR LLGMLASRIR VLVQERLGPG PYVAVHLCDL
QGNIVGEAP
|
|---|
| |