| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1765 |
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| Symbol | fliF |
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| ID | 6027121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | - |
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| Start bp | 1857062 |
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| End bp | 1858618 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641594582 |
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| Product | flagellar MS-ring protein |
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| Protein accession | YP_001717893 |
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| Protein GI | 169831911 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.604512 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGGGC AGGCCGTAGC GGCCAGGATG AACGAGCGGT GGCAGGCCTT GAGCACCACC
CACAAGGTTG CGCTCGTCTT GCTGGTCATA GGGTCCCTGT TGGTTCTGTA CTATCTGGCA
CAGTTTGTCC GGCAGATGAA TTACACTACG CTCTTTGCCG GTTTGGAGCC CAGAGAGGCC
GGGGCGATCG TGGAGCAGTT GGACGGGATG CGCATCCCCT ATATGCTAAG CGACGGGGGT
ACGACCATCC AAGTTCCCCG CGCCCAAGTG GACCAGGCCC GGATTCAGCT GGCAACCTCC
GGGGCCCTCG GGGCGGACGG CGCAGGATGG GAACTTTTTG ACCGCACCAA GCTGGGCGTT
ACCGAATTCG AACAGCAGGT CAACTACCAG CGGGCCCTTC AGGAGGAACT GCGTCGTACC
ATCGTCCAGT TGGACGAGGT GGAAGCGGCG CGGGTGCACC TGGTACTGCC CGAAAAAAGC
ATTTTCGCCA CCGAAAAGGC TCCCCCGACC GCGTCGGTGG CCGTAAAACT CCGCCCCGGC
ACGGACCTAA ACCAGAGCCA GGTCCGGGGG GTGGTGGCCT TGGTCGCCGG CAGTGTGGAG
GGGTTGACGC CGGAAAACGT GCACCTTGTC GACATGCGGG GCCGGCTTCT ACACCCGGAC
GGGCATCAGG ATCCGGTTTC GGGCCTGGCG CTTACCCACC AGGAAATCAA GCGCAACTAC
GAGCGCGAGT TGGAAATGCG GCTCCAGAAT ATGCTCCAGC GGATCGTGGG CCCCGACCGG
GTGGTGGTCA TGGTCTCCGC GGATCTGGAC TTTTCCCAGC AGCAATCGGT GTCCACGGTA
CCATACGGGG AAGCGCAGGT GGTGAGCGAG CAGACGGTGC GGGAAGAGAG CGAGGGTTCC
GGCACCGGGG GCGGCGTGCC CGGCACCGAT GCCAACCTGC CCGCCACCTA CCCGCTGGCC
GGCCGACCCG CTGACGCGGG TGCCCCGACA TCGTTCGTGC GGGAGGAGCG GACGGCGAAC
TACCAGGTGG GCACGCTCCA GCAAACGGTG ATTCAGCCGC CGGGAGAGGT TCGGCGCCTG
TCCACCTCGG TGGTGGTGGA CGGGGACTTA AGCGCCGCCC GGGCCGAGCA GATCCAGGGT
GTGGTCACCG CTGCCCTGGG GTACAACCCG GAACGGGGCG ACCAGATCCT GGTGGCACCG
ATGGCTTTTG ACACCACTTA CCAGGAGCAG TTGGAGGAAG ATCTGCGCCG GGCTGAGGCG
CTGGCCGCGG AACGGGAGCG CCGCCAGTTG ATCTACTACG CGGCGCTGGC CGGGGGCGTG
CTGCTCCTGC TCATAATCCT GATCATTGCC GGCGTGGTGG TGGGCCGGCG CCTCCAGCGG
GCTCCGCGCC CGCAGCCGCA GCCCGAGGTG GAGGAACTCT CGCCGCTGTC GGTGGCTGCG
GCGGCCGCGG ACCCGGTGTT TTTCCTGAGC GACAAGCAGC GGGGCGCCCG GGAACTGGCT
AGGCAAAAAC CGGAGGAAGT GGCACAGATC ATTAAGGTCT GGCTGACCGA GAAATAG
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| Protein sequence | MKGQAVAARM NERWQALSTT HKVALVLLVI GSLLVLYYLA QFVRQMNYTT LFAGLEPREA
GAIVEQLDGM RIPYMLSDGG TTIQVPRAQV DQARIQLATS GALGADGAGW ELFDRTKLGV
TEFEQQVNYQ RALQEELRRT IVQLDEVEAA RVHLVLPEKS IFATEKAPPT ASVAVKLRPG
TDLNQSQVRG VVALVAGSVE GLTPENVHLV DMRGRLLHPD GHQDPVSGLA LTHQEIKRNY
ERELEMRLQN MLQRIVGPDR VVVMVSADLD FSQQQSVSTV PYGEAQVVSE QTVREESEGS
GTGGGVPGTD ANLPATYPLA GRPADAGAPT SFVREERTAN YQVGTLQQTV IQPPGEVRRL
STSVVVDGDL SAARAEQIQG VVTAALGYNP ERGDQILVAP MAFDTTYQEQ LEEDLRRAEA
LAAERERRQL IYYAALAGGV LLLLIILIIA GVVVGRRLQR APRPQPQPEV EELSPLSVAA
AAADPVFFLS DKQRGARELA RQKPEEVAQI IKVWLTEK
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