| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1745 |
|---|
| Symbol | |
|---|
| ID | 6026307 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | - |
|---|
| Start bp | 1839049 |
|---|
| End bp | 1839696 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641594562 |
|---|
| Product | type IV pilus assembly PilZ |
|---|
| Protein accession | YP_001717873 |
|---|
| Protein GI | 169831891 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG5581] Predicted glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACTGG AAATCGGCCA GAAAATGTAT GTGGCCCGCG ACGAAGACGC GGACAGCTAC
GTGACCTCGC TCCAGGACAT GACCGGGGAG TATCTTTTGA TCGGTATCCC CTACTACCTC
GGTCAGCCCT TGATCCTGAT GCAGGGCGAC GCGATATTGG TGACCTACGT CGGCACTGAC
GGTGTGTACC GGTTTTCCAC CGTGTGCCGG GGACGCCGCA TGGACCGGGT TCCCTTGTAC
ATACTGGGCC GGCCGGAACA GGTGGAGCGG ATCCAGAGGC GGCGTTTGGT ACGCCTGCCG
GTAGCCCTGG AGGTCCGCGG CGGGGAGAAA CCGAACTACG GCAGCGTGCA GGAATACAGC
CGCTGGTACA CGTCGGACAT CAGCGCGGGC GGGATGAGCC TGATCTTGGA GAACCCTCCG
GCGGTGGGTA CCAAGCTGGT CCTGGAGTTC TCCATTCCGG TCCACGGCCG GCTCCGGCAT
ATTTTCGCCG ATGGTCAGGT GAAACGAGTC CAGCGGCTGG AAGGAAACGA TGGCGAGACA
CGTTTCGCGG TGGGGATCAG ATTTCAGGGG TTGTCCAAAG CCGATGAGGA TGCGATCGTC
GCTTTCATTT TCCGGAGGAT GGCTGAGGAG CGGCGTAGTA GGGGGTGA
|
|---|
| Protein sequence | MQLEIGQKMY VARDEDADSY VTSLQDMTGE YLLIGIPYYL GQPLILMQGD AILVTYVGTD
GVYRFSTVCR GRRMDRVPLY ILGRPEQVER IQRRRLVRLP VALEVRGGEK PNYGSVQEYS
RWYTSDISAG GMSLILENPP AVGTKLVLEF SIPVHGRLRH IFADGQVKRV QRLEGNDGET
RFAVGIRFQG LSKADEDAIV AFIFRRMAEE RRSRG
|
|---|
| |