Gene Daud_1742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_1742 
Symbol 
ID6027541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp1837106 
End bp1837846 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content65% 
IMG OID641594559 
Productflagellar basal body rod protein 
Protein accessionYP_001717870 
Protein GI169831888 
COG category[N] Cell motility 
COG ID[COG4786] Flagellar basal body rod protein 
TIGRFAM ID[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAGGG GAGTCTACAC TGCGGCTTCG GGCATGCTCG CCGGGCAGAC CCGCCTGGAT 
GCGGTGGCCC ATAATATCGC CAACGTCAAT ACCACGGGTT TCCGGCGACA GGTACCGGTC
TTTGCGCCCT ATCTACAGAC GGCGGTTGGG CGGCATGAAA AACGGGTGAC CCCTATCGGC
ACCACTTCCC TAGGGACCGT GCCCACGGCC CTGGTGACCG ATCTGACCGG GGGACCGGTG
GTCCAAACCG GGCGTACCAT GGACCTGGCC CTGGAGGGGG AAGGGTTTTT CACGGTGGAA
CGGGAGGGAC AACAGCTCTA CACCCGGGCC GGGTCATTCA AGGTAGACGC GTCCGGTATT
CTCGTCACCC GGGCGGGGGA CCCGGTGCTG GGGGAGCGCG GGCCGCTGAA GGTGGGGCAC
GATGGCTTCA CGGTGAGCGC GGACGGGCGG GTATTCTCGT CCACGGGGGA AGAACTGGAT
CGTTTGCGTC TGACAGCACT GCCCGGCCGG GAGACGTGGG TGCGTACTCC GGACGGTTAC
CTGATGACCG GGGAGGCGAC CGCGCCGGCC ATAAACACCC GGGTGCACCA GGGCTACCTG
GAGGGGTCCA ACGTACACCT GGCCGTGGAA CTGGTGGATC TGTTGCTGGC ATCGCGGCTT
TATGCGGCCA ACCAGCGTGT GGCCAGGACT CAAGACACGC TAGTTGAAAA GGCGATCAAC
CAGGTCGGCG CACTCCGGTA G
 
Protein sequence
MIRGVYTAAS GMLAGQTRLD AVAHNIANVN TTGFRRQVPV FAPYLQTAVG RHEKRVTPIG 
TTSLGTVPTA LVTDLTGGPV VQTGRTMDLA LEGEGFFTVE REGQQLYTRA GSFKVDASGI
LVTRAGDPVL GERGPLKVGH DGFTVSADGR VFSSTGEELD RLRLTALPGR ETWVRTPDGY
LMTGEATAPA INTRVHQGYL EGSNVHLAVE LVDLLLASRL YAANQRVART QDTLVEKAIN
QVGALR