| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1732 |
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| Symbol | |
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| ID | 6027096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | - |
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| Start bp | 1826153 |
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| End bp | 1828570 |
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| Gene Length | 2418 bp |
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| Protein Length | 805 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641594550 |
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| Product | tetratricopeptide TPR_4 |
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| Protein accession | YP_001717861 |
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| Protein GI | 169831879 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000559511 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAGAG CAGGCGCCAG AACCACGACC GTTCCCCTCG CCGCTGTCAC CCGGACCGCC
CAGCCGTTTT CCTTCACCTT CGCCTTCTGG GGCCTGATGA CCATCCTCTT TGCGAGTCCC
TATCTGCGGG GCCTTTTCTT TGCTGCGGAA CAGTACTGGG CTGTGGCCCT GGCCGCGGTG
CTGTTCTTTT TTGTCTGGGT CGGGAAAGTC GCCACCCATG AGAACCGGAT GTTTGAACAC
CCCCTGGACT ACCTCATGCC GGTCCTGCCG GCGCTCTACC TCTTCAGCGC CTTCTTCGCG
GTGAACACCG GAATGGCCGT GGACGAGATC GTCAGGGCTG TCCTGTACTT CCTGGCCTTC
TGGATCGCGG CTCGGGTGAT CAGCTCCGCC GACGACCTGC ACCGGGTATT CCACGTCATC
TACCTGAGCG CCGCCGGCGT GGCCTTGGCC GGACTGGCCA CCGCCACCGG CATCATTGAA
ATCCGGGACG GCTTCCTGGG GGGGCGCATC TACTCCACTT TCCAGTACCC GAACGCCCTG
GCGAACTACC TCATGGCCGT GCTCTTCCTG GGGTTCTACC TGTGGCAGCG CCGGGTGGTG
GAACCGCCCC CAGAGGGACA AAACCCCTTC ATCCAGATGG GCGTGCCGCA ATGGCTTAAG
AATTTCGACC CCTACCCCTA CTACTACGCC CTTGGTAACT TTTTGCTCAT GGCCGTATTC
TTCGGGACGA AATCCCAGGG CGGCTTCATC GTCTTCGGCC TGCTGTTGCC GCTATTTGTG
TTCGGGCTGC CTGCCGAACG GCGCTTTCCG GTGGCGGTCC ATCTACTGCT GGTGGCTGTG
CCGGCCCTCC TGGCTATTAA CCGTTTCCTG GCCGCCGTTG CGGACGGACG GCTTGAGCCG
GCCTGGCTCT GGGTACTCCT GGGGCTGTTC CTGGTCGCCT TGGGGCAGCT CCTGTGGGGG
CGGCTATACC GGTCTTCCCT GCGGGCGTGG GTCGAGCAGC GCGGTCCGGC CGCGGCCCTG
GGCGGGCTGG CCCTGGGCCT GGCGGGCGCG GCCGTTTTCA TCCTGGTCAA CTGGGAAAGG
TTCCAGGCTA TGGTCAAGTG GCATAACCTG GAACACCGTG TTTACTTCAT CGCCACCGCC
TGGGAAATGG TGCTGGCGAG GCCCCTCACC GGCTGGGGAG GCGGCGGCTG GGCGGAGGCC
TATCAGGCCT TTCTGCCCTA CCTGTTCACC AGCCGGCAGG TGCACGGCCA CTACCTGCAG
GTGGGCGTGG AGACCGGTAT CCTTGGGATG TTCCTGTTTG CGGCGATCTG GGGGGTTTTT
CTCTGGACGG CCTACCGTCT GTACCTGAAA AGCGCCAAAG ACCCCGGGCG GCGCACCCTG
GTCTGGACGA TGGTGCTGGC CTGCCTGGCC GTCGGCATTC ACTCGGCGCT CGACTTCAAC
TTCTCGCTCG GGGCCCTGGC GCTGGTGGTC TGGGTCCTGT TCGGGGCGCT GGTAGGCCTG
GAGCGGGAAG CACGAACCGC CGCGGCGGCG GTGGAGGCGG TGCGCCGGAA GAAGCGTAAA
CTGTCGTCCT ACGTACCGCC GGACTACAAC CGGCTGACCG CCGTAGGCAT CTGCGCCGGG
CTGCTTGTCT GCGGCGTGCT GGTCCTGTCC GCTGCTTCCG CGAAGGCGGC CCAGGGCGCG
GCGCTTCTGC AGCAGGGGCA GTTGAAGGAA GGACTCGGGG CCGTGCAGCT TGCGGCGGCC
TACAACCCGT TCAACGGCGA TTACAACTAC CTGCTTGCCC AGATCTACCA GGCCCGCGGC
GACCAGGACG CCGCGCTGGC GGAGATCGAG CGGGCCGTCA ACAAGAGCCG GTACAACCCG
GCCTACCACG AATTCCGGGC GCACCTCCTG AGCGCCCGGG GCGACTACGA AGCCGCTGCG
GCCGGCGCCG AGGAGGCGGT GACCAAAGCC CCACTGGCCG TGGGCCGCTA CGAGGCTCTG
GTGCGCACCT ATTTCACGGC CGGCTACGGG GAGATTCAAG GGGACGACCC GGAAGCGGCC
CGAGAGTACT TCGAGGCCGT CCTGGCCGTG CCGGCACGGA TGGAGGCGGT CATGGCCGGG
CTCTCCGACA CCGAAAAACG TCTCTGGTCG GGACCTCAAC TGGGGGTGAC CGGCGCCATG
CAGTTCCCGC TCGGCGCCGC CCATTATTTC CTGGGCGAGT TCGAGGCCGC CGCCGCCGCC
TTCGAAGCGG CCGCCGGCAC CGAAGAAGAT GAAACCGCCC GGGGTGAGAT CCTGGTCTGG
CAGGCCGTGG TGGCCGAGGC GCAGGGGGAC ACGGAGCAAG CGGGCGCGTT CCTGGCCGAA
GCCGGGAAAC TGAACCCGGA AGCGCCCGGG ATTTACGCCG GGATCAGGGA ACTGCCGGTC
CTGCAAAAAG TGAAGTGA
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| Protein sequence | MTRAGARTTT VPLAAVTRTA QPFSFTFAFW GLMTILFASP YLRGLFFAAE QYWAVALAAV
LFFFVWVGKV ATHENRMFEH PLDYLMPVLP ALYLFSAFFA VNTGMAVDEI VRAVLYFLAF
WIAARVISSA DDLHRVFHVI YLSAAGVALA GLATATGIIE IRDGFLGGRI YSTFQYPNAL
ANYLMAVLFL GFYLWQRRVV EPPPEGQNPF IQMGVPQWLK NFDPYPYYYA LGNFLLMAVF
FGTKSQGGFI VFGLLLPLFV FGLPAERRFP VAVHLLLVAV PALLAINRFL AAVADGRLEP
AWLWVLLGLF LVALGQLLWG RLYRSSLRAW VEQRGPAAAL GGLALGLAGA AVFILVNWER
FQAMVKWHNL EHRVYFIATA WEMVLARPLT GWGGGGWAEA YQAFLPYLFT SRQVHGHYLQ
VGVETGILGM FLFAAIWGVF LWTAYRLYLK SAKDPGRRTL VWTMVLACLA VGIHSALDFN
FSLGALALVV WVLFGALVGL EREARTAAAA VEAVRRKKRK LSSYVPPDYN RLTAVGICAG
LLVCGVLVLS AASAKAAQGA ALLQQGQLKE GLGAVQLAAA YNPFNGDYNY LLAQIYQARG
DQDAALAEIE RAVNKSRYNP AYHEFRAHLL SARGDYEAAA AGAEEAVTKA PLAVGRYEAL
VRTYFTAGYG EIQGDDPEAA REYFEAVLAV PARMEAVMAG LSDTEKRLWS GPQLGVTGAM
QFPLGAAHYF LGEFEAAAAA FEAAAGTEED ETARGEILVW QAVVAEAQGD TEQAGAFLAE
AGKLNPEAPG IYAGIRELPV LQKVK
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